Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40ALP0C0E4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
RAB40ALP0C0E4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 FAM87A-204ENST00000613235 858 ntBASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 AC009237.14-201ENST00000609975 1594 ntBASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.2■□□□□ 0.5
RAB40ALP0C0E4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 HMGA1P5-201ENST00000412453 271 ntBASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 DUX4L26-201ENST00000489078 1255 ntBASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.19■□□□□ 0.5
RAB40ALP0C0E4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 AC073314.1-201ENST00000568729 2216 ntBASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 AC104076.2-201ENST00000448912 469 ntBASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 AC010653.2-201ENST00000623505 997 ntBASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40ALP0C0E4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 BX664615.1-201ENST00000443558 458 ntBASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40ALP0C0E4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40ALP0C0E4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms