Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HOXC6P09630 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HOXC6P09630 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HOXC6P09630 AC026396.1-201ENST00000419388 421 ntBASIC21.84■■□□□ 1.09
HOXC6P09630 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.84■■□□□ 1.09
HOXC6P09630 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.84■■□□□ 1.09
HOXC6P09630 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
HOXC6P09630 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HOXC6P09630 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.84■■□□□ 1.09
HOXC6P09630 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
HOXC6P09630 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HOXC6P09630 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HOXC6P09630 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
HOXC6P09630 AC073314.1-201ENST00000568729 2216 ntBASIC21.83■■□□□ 1.09
HOXC6P09630 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HOXC6P09630 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.83■■□□□ 1.09
HOXC6P09630 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.83■■□□□ 1.09
HOXC6P09630 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.83■■□□□ 1.09
HOXC6P09630 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.83■■□□□ 1.09
HOXC6P09630 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.83■■□□□ 1.09
HOXC6P09630 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.83■■□□□ 1.09
HOXC6P09630 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.83■■□□□ 1.09
HOXC6P09630 GCSHP2-201ENST00000560971 527 ntBASIC21.83■■□□□ 1.09
HOXC6P09630 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.83■■□□□ 1.09
HOXC6P09630 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HOXC6P09630 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.83■■□□□ 1.09
HOXC6P09630 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HOXC6P09630 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HOXC6P09630 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HOXC6P09630 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
HOXC6P09630 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
HOXC6P09630 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HOXC6P09630 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.83■■□□□ 1.08
HOXC6P09630 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
HOXC6P09630 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HOXC6P09630 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
HOXC6P09630 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HOXC6P09630 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HOXC6P09630 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXC6P09630 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXC6P09630 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXC6P09630 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
HOXC6P09630 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.82■■□□□ 1.08
HOXC6P09630 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.82■■□□□ 1.08
HOXC6P09630 ATP5G2P1-201ENST00000433580 426 ntBASIC21.82■■□□□ 1.08
HOXC6P09630 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.82■■□□□ 1.08
HOXC6P09630 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.82■■□□□ 1.08
HOXC6P09630 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.82■■□□□ 1.08
HOXC6P09630 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.82■■□□□ 1.08
HOXC6P09630 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HOXC6P09630 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC21.82■■□□□ 1.08
HOXC6P09630 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HOXC6P09630 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
HOXC6P09630 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
HOXC6P09630 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.81■■□□□ 1.08
HOXC6P09630 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.81■■□□□ 1.08
HOXC6P09630 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.81■■□□□ 1.08
HOXC6P09630 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
HOXC6P09630 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.81■■□□□ 1.08
HOXC6P09630 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
HOXC6P09630 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HOXC6P09630 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXC6P09630 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.8■■□□□ 1.08
HOXC6P09630 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.8■■□□□ 1.08
HOXC6P09630 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXC6P09630 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXC6P09630 AP005212.1-201ENST00000581547 1997 ntBASIC21.8■■□□□ 1.08
HOXC6P09630 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.8■■□□□ 1.08
HOXC6P09630 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HOXC6P09630 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.8■■□□□ 1.08
HOXC6P09630 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.8■■□□□ 1.08
HOXC6P09630 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.8■■□□□ 1.08
HOXC6P09630 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.8■■□□□ 1.08
HOXC6P09630 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.8■■□□□ 1.08
HOXC6P09630 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXC6P09630 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXC6P09630 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXC6P09630 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
HOXC6P09630 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.8■■□□□ 1.08
HOXC6P09630 LINC01311-201ENST00000565162 1445 ntBASIC21.8■■□□□ 1.08
HOXC6P09630 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
HOXC6P09630 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
HOXC6P09630 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.8■■□□□ 1.08
HOXC6P09630 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HOXC6P09630 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
HOXC6P09630 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC6P09630 AC009237.14-201ENST00000609975 1594 ntBASIC21.79■■□□□ 1.08
HOXC6P09630 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC6P09630 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC6P09630 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms