Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.11■□□□□ 0.97
CLTAP09496 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.11■□□□□ 0.97
CLTAP09496 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CLTAP09496 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CLTAP09496 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.11■□□□□ 0.97
CLTAP09496 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC21.11■□□□□ 0.97
CLTAP09496 AC004980.1-204ENST00000429707 299 ntBASIC21.11■□□□□ 0.97
CLTAP09496 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.11■□□□□ 0.97
CLTAP09496 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CLTAP09496 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.11■□□□□ 0.97
CLTAP09496 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.11■□□□□ 0.97
CLTAP09496 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.11■□□□□ 0.97
CLTAP09496 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.11■□□□□ 0.97
CLTAP09496 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLTAP09496 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CLTAP09496 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLTAP09496 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.1■□□□□ 0.97
CLTAP09496 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.1■□□□□ 0.97
CLTAP09496 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLTAP09496 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLTAP09496 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.1■□□□□ 0.97
CLTAP09496 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.1■□□□□ 0.97
CLTAP09496 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLTAP09496 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.1■□□□□ 0.97
CLTAP09496 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.1■□□□□ 0.97
CLTAP09496 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.1■□□□□ 0.97
CLTAP09496 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.1■□□□□ 0.97
CLTAP09496 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.1■□□□□ 0.97
CLTAP09496 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLTAP09496 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLTAP09496 TREX1-205ENST00000625293 1783 ntBASIC21.1■□□□□ 0.97
CLTAP09496 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.1■□□□□ 0.97
CLTAP09496 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLTAP09496 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CLTAP09496 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CLTAP09496 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 AL020996.1-203ENST00000536896 2307 ntBASIC21.09■□□□□ 0.97
CLTAP09496 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.09■□□□□ 0.97
CLTAP09496 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.09■□□□□ 0.97
CLTAP09496 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.09■□□□□ 0.97
CLTAP09496 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.09■□□□□ 0.97
CLTAP09496 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.09■□□□□ 0.97
CLTAP09496 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CLTAP09496 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CLTAP09496 AC116562.2-201ENST00000507042 360 ntBASIC21.09■□□□□ 0.97
CLTAP09496 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.09■□□□□ 0.97
CLTAP09496 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.09■□□□□ 0.97
CLTAP09496 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.09■□□□□ 0.97
CLTAP09496 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLTAP09496 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.08■□□□□ 0.97
CLTAP09496 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.08■□□□□ 0.97
CLTAP09496 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.08■□□□□ 0.97
CLTAP09496 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLTAP09496 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.08■□□□□ 0.97
CLTAP09496 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLTAP09496 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLTAP09496 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLTAP09496 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLTAP09496 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.08■□□□□ 0.97
CLTAP09496 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.08■□□□□ 0.97
CLTAP09496 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.08■□□□□ 0.97
CLTAP09496 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLTAP09496 AL355075.4-201ENST00000554988 638 ntBASIC21.08■□□□□ 0.97
CLTAP09496 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.08■□□□□ 0.97
CLTAP09496 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.08■□□□□ 0.97
CLTAP09496 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.08■□□□□ 0.97
CLTAP09496 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLTAP09496 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.08■□□□□ 0.96
CLTAP09496 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.08■□□□□ 0.96
CLTAP09496 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLTAP09496 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CLTAP09496 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CLTAP09496 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLTAP09496 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLTAP09496 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC21.07■□□□□ 0.96
CLTAP09496 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CLTAP09496 AL158211.5-201ENST00000623583 2518 ntBASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms