Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
PDGFAP04085 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.03■□□□□ 0.48
PDGFAP04085 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.03■□□□□ 0.48
PDGFAP04085 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFAP04085 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDGFAP04085 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PDGFAP04085 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFAP04085 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PDGFAP04085 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFAP04085 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
PDGFAP04085 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.02■□□□□ 0.48
PDGFAP04085 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
PDGFAP04085 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFAP04085 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFAP04085 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFAP04085 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.02■□□□□ 0.48
PDGFAP04085 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFAP04085 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFAP04085 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFAP04085 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PDGFAP04085 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFAP04085 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PDGFAP04085 YBX1P10-201ENST00000444752 975 ntBASIC18.02■□□□□ 0.48
PDGFAP04085 AC128688.1-201ENST00000487626 519 ntBASIC18.02■□□□□ 0.48
PDGFAP04085 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.02■□□□□ 0.48
PDGFAP04085 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.02■□□□□ 0.48
PDGFAP04085 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.02■□□□□ 0.48
PDGFAP04085 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.02■□□□□ 0.48
PDGFAP04085 AC130371.2-201ENST00000619443 611 ntBASIC18.02■□□□□ 0.48
PDGFAP04085 AC131212.4-201ENST00000623606 975 ntBASIC18.02■□□□□ 0.48
PDGFAP04085 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.02■□□□□ 0.47
PDGFAP04085 DPP3P2-201ENST00000416030 1696 ntBASIC18.02■□□□□ 0.47
PDGFAP04085 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFAP04085 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
PDGFAP04085 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFAP04085 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.02■□□□□ 0.47
PDGFAP04085 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFAP04085 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFAP04085 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PDGFAP04085 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PDGFAP04085 AC018553.1-201ENST00000616682 1458 ntBASIC18.01■□□□□ 0.47
PDGFAP04085 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFAP04085 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.01■□□□□ 0.47
PDGFAP04085 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.01■□□□□ 0.47
PDGFAP04085 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.01■□□□□ 0.47
PDGFAP04085 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 AC139887.4-201ENST00000607877 719 ntBASIC18.01■□□□□ 0.47
PDGFAP04085 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PDGFAP04085 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PDGFAP04085 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18■□□□□ 0.47
PDGFAP04085 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18■□□□□ 0.47
PDGFAP04085 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 TUBB8P6-201ENST00000436895 1288 ntBASIC18■□□□□ 0.47
PDGFAP04085 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18■□□□□ 0.47
PDGFAP04085 AC091390.4-202ENST00000476426 537 ntBASIC18■□□□□ 0.47
PDGFAP04085 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18■□□□□ 0.47
PDGFAP04085 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18■□□□□ 0.47
PDGFAP04085 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
PDGFAP04085 AP000692.2-201ENST00000608391 879 ntBASIC18■□□□□ 0.47
PDGFAP04085 MYC-208ENST00000641036 567 ntBASIC18■□□□□ 0.47
PDGFAP04085 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18■□□□□ 0.47
PDGFAP04085 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PDGFAP04085 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
PDGFAP04085 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDGFAP04085 RCC2P6-201ENST00000526625 1557 ntBASIC18■□□□□ 0.47
PDGFAP04085 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFAP04085 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.99■□□□□ 0.47
PDGFAP04085 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.99■□□□□ 0.47
PDGFAP04085 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFAP04085 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.99■□□□□ 0.47
PDGFAP04085 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDGFAP04085 FP700111.2-201ENST00000619190 1892 ntBASIC17.99■□□□□ 0.47
PDGFAP04085 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
PDGFAP04085 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms