Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
HLA-DQA1P01909 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 AC141586.3-201ENST00000562166 1838 ntBASIC14.51□□□□□ -0.09
HLA-DQA1P01909 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 EEF1DP3-203ENST00000566025 782 ntBASIC14.51□□□□□ -0.09
HLA-DQA1P01909 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HLA-DQA1P01909 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 AC005224.4-201ENST00000583262 1652 ntBASIC14.5□□□□□ -0.09
HLA-DQA1P01909 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 POU5F1P4-201ENST00000413175 1085 ntBASIC14.5□□□□□ -0.09
HLA-DQA1P01909 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 AC027682.1-201ENST00000562846 899 ntBASIC14.5□□□□□ -0.09
HLA-DQA1P01909 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 AC008175.2-201ENST00000612840 297 ntBASIC14.5□□□□□ -0.09
HLA-DQA1P01909 AC106739.1-201ENST00000617035 715 ntBASIC14.5□□□□□ -0.09
HLA-DQA1P01909 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HLA-DQA1P01909 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 BX842568.3-201ENST00000418104 571 ntBASIC14.49□□□□□ -0.09
HLA-DQA1P01909 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.49□□□□□ -0.09
HLA-DQA1P01909 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 AL139246.5-201ENST00000606645 996 ntBASIC14.49□□□□□ -0.09
HLA-DQA1P01909 AC233992.3-201ENST00000607491 485 ntBASIC14.49□□□□□ -0.09
HLA-DQA1P01909 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms