Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CBX6O95503 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CBX6O95503 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.2■□□□□ 0.66
CBX6O95503 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CBX6O95503 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CBX6O95503 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.2■□□□□ 0.66
CBX6O95503 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.2■□□□□ 0.66
CBX6O95503 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.2■□□□□ 0.66
CBX6O95503 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
CBX6O95503 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.2■□□□□ 0.66
CBX6O95503 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 AC008694.1-202ENST00000636953 945 ntBASIC19.2■□□□□ 0.66
CBX6O95503 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CBX6O95503 AL161938.1-201ENST00000569833 2180 ntBASIC19.2■□□□□ 0.66
CBX6O95503 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CBX6O95503 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CBX6O95503 AC006333.2-201ENST00000607957 2099 ntBASIC19.2■□□□□ 0.66
CBX6O95503 AP000997.3-201ENST00000623333 2250 ntBASIC19.2■□□□□ 0.66
CBX6O95503 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.19■□□□□ 0.66
CBX6O95503 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.19■□□□□ 0.66
CBX6O95503 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.19■□□□□ 0.66
CBX6O95503 AC093787.1-201ENST00000450396 207 ntBASIC19.19■□□□□ 0.66
CBX6O95503 RARRES2P4-201ENST00000514074 484 ntBASIC19.19■□□□□ 0.66
CBX6O95503 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.19■□□□□ 0.66
CBX6O95503 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.19■□□□□ 0.66
CBX6O95503 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.19■□□□□ 0.66
CBX6O95503 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.19■□□□□ 0.66
CBX6O95503 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CBX6O95503 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CBX6O95503 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CBX6O95503 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CBX6O95503 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.18■□□□□ 0.66
CBX6O95503 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX6O95503 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.18■□□□□ 0.66
CBX6O95503 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.18■□□□□ 0.66
CBX6O95503 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CBX6O95503 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX6O95503 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.18■□□□□ 0.66
CBX6O95503 GCSHP5-201ENST00000443090 522 ntBASIC19.18■□□□□ 0.66
CBX6O95503 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX6O95503 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.18■□□□□ 0.66
CBX6O95503 PLLP-204ENST00000569059 665 ntTSL 3 BASIC19.18■□□□□ 0.66
CBX6O95503 AC069236.1-201ENST00000604339 616 ntBASIC19.18■□□□□ 0.66
CBX6O95503 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.18■□□□□ 0.66
CBX6O95503 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.18■□□□□ 0.66
CBX6O95503 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CBX6O95503 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CBX6O95503 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.18■□□□□ 0.66
CBX6O95503 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.18■□□□□ 0.66
CBX6O95503 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.18■□□□□ 0.66
CBX6O95503 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CBX6O95503 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.18■□□□□ 0.66
CBX6O95503 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CBX6O95503 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CBX6O95503 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX6O95503 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX6O95503 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CBX6O95503 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms