Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX6O95475 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX6O95475 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.15■□□□□ 0.18
SIX6O95475 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX6O95475 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.15■□□□□ 0.18
SIX6O95475 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIX6O95475 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.15■□□□□ 0.18
SIX6O95475 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX6O95475 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.15■□□□□ 0.18
SIX6O95475 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.15■□□□□ 0.18
SIX6O95475 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.15■□□□□ 0.18
SIX6O95475 AC009053.2-201ENST00000563701 2365 ntBASIC16.15■□□□□ 0.18
SIX6O95475 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIX6O95475 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SIX6O95475 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SIX6O95475 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SIX6O95475 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.15■□□□□ 0.18
SIX6O95475 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SIX6O95475 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
SIX6O95475 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
SIX6O95475 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SIX6O95475 PRORSD1P-202ENST00000563365 2154 ntBASIC16.14■□□□□ 0.17
SIX6O95475 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
SIX6O95475 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SIX6O95475 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX6O95475 ABALON-201ENST00000629058 1903 ntBASIC16.14■□□□□ 0.17
SIX6O95475 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX6O95475 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
SIX6O95475 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX6O95475 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX6O95475 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 MFF-208ENST00000409616 1247 ntTSL 5 BASIC16.14■□□□□ 0.17
SIX6O95475 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX6O95475 AC007322.3-201ENST00000426526 701 ntBASIC16.14■□□□□ 0.17
SIX6O95475 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.14■□□□□ 0.17
SIX6O95475 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SIX6O95475 AC120498.10-201ENST00000621827 505 ntBASIC16.14■□□□□ 0.17
SIX6O95475 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.14■□□□□ 0.17
SIX6O95475 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC16.14■□□□□ 0.17
SIX6O95475 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SIX6O95475 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
SIX6O95475 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SIX6O95475 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SIX6O95475 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIX6O95475 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SIX6O95475 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SIX6O95475 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.13■□□□□ 0.17
SIX6O95475 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.13■□□□□ 0.17
SIX6O95475 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SIX6O95475 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
SIX6O95475 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.13■□□□□ 0.17
SIX6O95475 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIX6O95475 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 KRT16P6-202ENST00000425692 1426 ntBASIC16.12■□□□□ 0.17
SIX6O95475 KRT8P17-201ENST00000453110 1448 ntBASIC16.12■□□□□ 0.17
SIX6O95475 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
SIX6O95475 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SIX6O95475 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SIX6O95475 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIX6O95475 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC16.12■□□□□ 0.17
SIX6O95475 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.12■□□□□ 0.17
SIX6O95475 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.12■□□□□ 0.17
SIX6O95475 TRIR-202ENST00000588213 841 ntTSL 3 BASIC16.12■□□□□ 0.17
SIX6O95475 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms