Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.52■□□□□ 0.72
USP1O94782 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
USP1O94782 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP1O94782 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
USP1O94782 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
USP1O94782 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.52■□□□□ 0.72
USP1O94782 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP1O94782 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
USP1O94782 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.52■□□□□ 0.72
USP1O94782 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.52■□□□□ 0.72
USP1O94782 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.52■□□□□ 0.72
USP1O94782 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.52■□□□□ 0.72
USP1O94782 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.52■□□□□ 0.72
USP1O94782 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.52■□□□□ 0.72
USP1O94782 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.52■□□□□ 0.71
USP1O94782 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP1O94782 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP1O94782 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP1O94782 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP1O94782 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
USP1O94782 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP1O94782 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
USP1O94782 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
USP1O94782 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
USP1O94782 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.51■□□□□ 0.71
USP1O94782 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP1O94782 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.51■□□□□ 0.71
USP1O94782 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP1O94782 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP1O94782 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.51■□□□□ 0.71
USP1O94782 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.51■□□□□ 0.71
USP1O94782 AL121829.2-201ENST00000620908 328 ntBASIC19.51■□□□□ 0.71
USP1O94782 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
USP1O94782 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.51■□□□□ 0.71
USP1O94782 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP1O94782 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP1O94782 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
USP1O94782 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
USP1O94782 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
USP1O94782 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.5■□□□□ 0.71
USP1O94782 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.5■□□□□ 0.71
USP1O94782 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.5■□□□□ 0.71
USP1O94782 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
USP1O94782 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.5■□□□□ 0.71
USP1O94782 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.5■□□□□ 0.71
USP1O94782 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
USP1O94782 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.5■□□□□ 0.71
USP1O94782 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.5■□□□□ 0.71
USP1O94782 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.5■□□□□ 0.71
USP1O94782 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.5■□□□□ 0.71
USP1O94782 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
USP1O94782 AC104417.2-201ENST00000562989 1793 ntBASIC19.49■□□□□ 0.71
USP1O94782 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.49■□□□□ 0.71
USP1O94782 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.49■□□□□ 0.71
USP1O94782 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
USP1O94782 AL161938.1-201ENST00000569833 2180 ntBASIC19.49■□□□□ 0.71
USP1O94782 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
USP1O94782 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.49■□□□□ 0.71
USP1O94782 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 SOX15-203ENST00000570788 1093 ntBASIC19.49■□□□□ 0.71
USP1O94782 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.49■□□□□ 0.71
USP1O94782 AC008687.6-201ENST00000596318 630 ntBASIC19.49■□□□□ 0.71
USP1O94782 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.49■□□□□ 0.71
USP1O94782 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.49■□□□□ 0.71
USP1O94782 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
USP1O94782 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.49■□□□□ 0.71
USP1O94782 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms