Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
CDKL5O76039 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC22.46■■□□□ 1.19
CDKL5O76039 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.46■■□□□ 1.19
CDKL5O76039 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.46■■□□□ 1.19
CDKL5O76039 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.46■■□□□ 1.19
CDKL5O76039 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
CDKL5O76039 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
CDKL5O76039 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
CDKL5O76039 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDKL5O76039 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.46■■□□□ 1.19
CDKL5O76039 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
CDKL5O76039 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC22.46■■□□□ 1.19
CDKL5O76039 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
CDKL5O76039 AC018445.3-201ENST00000624177 1945 ntBASIC22.45■■□□□ 1.18
CDKL5O76039 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.45■■□□□ 1.18
CDKL5O76039 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.45■■□□□ 1.18
CDKL5O76039 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
CDKL5O76039 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.45■■□□□ 1.18
CDKL5O76039 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.45■■□□□ 1.18
CDKL5O76039 HLA-A-209ENST00000638375 975 ntBASIC22.45■■□□□ 1.18
CDKL5O76039 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CDKL5O76039 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.45■■□□□ 1.18
CDKL5O76039 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC22.45■■□□□ 1.18
CDKL5O76039 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CDKL5O76039 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
CDKL5O76039 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
CDKL5O76039 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.44■■□□□ 1.18
CDKL5O76039 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CDKL5O76039 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
CDKL5O76039 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC22.44■■□□□ 1.18
CDKL5O76039 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.44■■□□□ 1.18
CDKL5O76039 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC22.44■■□□□ 1.18
CDKL5O76039 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.44■■□□□ 1.18
CDKL5O76039 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
CDKL5O76039 C1QBPP2-201ENST00000528754 825 ntBASIC22.44■■□□□ 1.18
CDKL5O76039 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC22.44■■□□□ 1.18
CDKL5O76039 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC22.44■■□□□ 1.18
CDKL5O76039 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
CDKL5O76039 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDKL5O76039 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDKL5O76039 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CDKL5O76039 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC22.43■■□□□ 1.18
CDKL5O76039 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
CDKL5O76039 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.43■■□□□ 1.18
CDKL5O76039 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.43■■□□□ 1.18
CDKL5O76039 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.43■■□□□ 1.18
CDKL5O76039 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDKL5O76039 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDKL5O76039 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CDKL5O76039 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CDKL5O76039 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
CDKL5O76039 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDKL5O76039 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.42■■□□□ 1.18
CDKL5O76039 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.42■■□□□ 1.18
CDKL5O76039 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDKL5O76039 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.42■■□□□ 1.18
CDKL5O76039 LINC01465-201ENST00000408887 1940 ntBASIC22.42■■□□□ 1.18
CDKL5O76039 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.42■■□□□ 1.18
CDKL5O76039 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CDKL5O76039 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CDKL5O76039 RNF121-214ENST00000533380 870 ntTSL 3 BASIC22.42■■□□□ 1.18
CDKL5O76039 AL160286.2-201ENST00000567150 934 ntBASIC22.42■■□□□ 1.18
CDKL5O76039 ITM2C-210ENST00000620962 501 ntBASIC22.42■■□□□ 1.18
CDKL5O76039 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.42■■□□□ 1.18
CDKL5O76039 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CDKL5O76039 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CDKL5O76039 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
CDKL5O76039 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDKL5O76039 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDKL5O76039 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.41■■□□□ 1.18
CDKL5O76039 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDKL5O76039 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.41■■□□□ 1.18
CDKL5O76039 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CDKL5O76039 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CDKL5O76039 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CDKL5O76039 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CDKL5O76039 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms