Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFRA3O60609 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.79■□□□□ 0.6
GFRA3O60609 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
GFRA3O60609 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.79■□□□□ 0.6
GFRA3O60609 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.79■□□□□ 0.6
GFRA3O60609 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.79■□□□□ 0.6
GFRA3O60609 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.79■□□□□ 0.6
GFRA3O60609 HLA-F-220ENST00000434407 884 ntBASIC18.79■□□□□ 0.6
GFRA3O60609 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.79■□□□□ 0.6
GFRA3O60609 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.79■□□□□ 0.6
GFRA3O60609 AC090616.6-201ENST00000582640 721 ntBASIC18.79■□□□□ 0.6
GFRA3O60609 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.79■□□□□ 0.6
GFRA3O60609 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.79■□□□□ 0.6
GFRA3O60609 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.79■□□□□ 0.6
GFRA3O60609 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFRA3O60609 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.78■□□□□ 0.6
GFRA3O60609 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.78■□□□□ 0.6
GFRA3O60609 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.78■□□□□ 0.6
GFRA3O60609 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
GFRA3O60609 KRT16P6-202ENST00000425692 1426 ntBASIC18.78■□□□□ 0.6
GFRA3O60609 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFRA3O60609 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFRA3O60609 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.78■□□□□ 0.6
GFRA3O60609 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFRA3O60609 IGHV3-41-201ENST00000613121 348 ntBASIC18.78■□□□□ 0.6
GFRA3O60609 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.78■□□□□ 0.6
GFRA3O60609 AC079602.3-201ENST00000623931 403 ntBASIC18.78■□□□□ 0.6
GFRA3O60609 AC134684.3-201ENST00000641758 218 ntBASIC18.78■□□□□ 0.6
GFRA3O60609 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.78■□□□□ 0.6
GFRA3O60609 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFRA3O60609 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFRA3O60609 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFRA3O60609 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GFRA3O60609 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFRA3O60609 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.77■□□□□ 0.6
GFRA3O60609 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.77■□□□□ 0.6
GFRA3O60609 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
GFRA3O60609 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GFRA3O60609 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GFRA3O60609 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.77■□□□□ 0.6
GFRA3O60609 NUS1P2-201ENST00000417358 873 ntBASIC18.77■□□□□ 0.6
GFRA3O60609 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFRA3O60609 HLA-J-202ENST00000469281 1241 ntBASIC18.77■□□□□ 0.6
GFRA3O60609 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.77■□□□□ 0.6
GFRA3O60609 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.77■□□□□ 0.6
GFRA3O60609 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.77■□□□□ 0.6
GFRA3O60609 AL136038.4-201ENST00000603606 1261 ntBASIC18.77■□□□□ 0.6
GFRA3O60609 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.77■□□□□ 0.6
GFRA3O60609 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.77■□□□□ 0.6
GFRA3O60609 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFRA3O60609 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.77■□□□□ 0.6
GFRA3O60609 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.77■□□□□ 0.6
GFRA3O60609 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
GFRA3O60609 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.77■□□□□ 0.6
GFRA3O60609 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
GFRA3O60609 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
GFRA3O60609 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GFRA3O60609 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.77■□□□□ 0.59
GFRA3O60609 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFRA3O60609 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFRA3O60609 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFRA3O60609 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.76■□□□□ 0.59
GFRA3O60609 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GFRA3O60609 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.76■□□□□ 0.59
GFRA3O60609 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.76■□□□□ 0.59
GFRA3O60609 CYMP-203ENST00000474680 1263 ntBASIC18.76■□□□□ 0.59
GFRA3O60609 AC112482.1-201ENST00000492080 688 ntBASIC18.76■□□□□ 0.59
GFRA3O60609 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.76■□□□□ 0.59
GFRA3O60609 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
GFRA3O60609 AC027601.4-201ENST00000611259 610 ntBASIC18.76■□□□□ 0.59
GFRA3O60609 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
GFRA3O60609 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFRA3O60609 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFRA3O60609 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GFRA3O60609 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.75■□□□□ 0.59
GFRA3O60609 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
GFRA3O60609 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 DNAJB3-201ENST00000446806 729 ntBASIC18.75■□□□□ 0.59
GFRA3O60609 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
GFRA3O60609 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.75■□□□□ 0.59
GFRA3O60609 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
GFRA3O60609 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms