Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.75■□□□□ 0.11
SSSCA1O60232 PEMT-206ENST00000435340 960 ntTSL 5 BASIC15.75■□□□□ 0.11
SSSCA1O60232 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.75■□□□□ 0.11
SSSCA1O60232 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.75■□□□□ 0.11
SSSCA1O60232 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.75■□□□□ 0.11
SSSCA1O60232 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.75■□□□□ 0.11
SSSCA1O60232 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.75■□□□□ 0.11
SSSCA1O60232 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SSSCA1O60232 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.75■□□□□ 0.11
SSSCA1O60232 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SSSCA1O60232 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
SSSCA1O60232 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.74■□□□□ 0.11
SSSCA1O60232 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SSSCA1O60232 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
SSSCA1O60232 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SSSCA1O60232 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.74■□□□□ 0.11
SSSCA1O60232 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SSSCA1O60232 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.74■□□□□ 0.11
SSSCA1O60232 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.74■□□□□ 0.11
SSSCA1O60232 AL591742.1-201ENST00000604433 565 ntBASIC15.74■□□□□ 0.11
SSSCA1O60232 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
SSSCA1O60232 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SSSCA1O60232 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 AC004854.2-201ENST00000608450 1441 ntBASIC15.74■□□□□ 0.11
SSSCA1O60232 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.74■□□□□ 0.11
SSSCA1O60232 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SSSCA1O60232 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.74■□□□□ 0.11
SSSCA1O60232 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SSSCA1O60232 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SSSCA1O60232 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC15.73■□□□□ 0.11
SSSCA1O60232 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SSSCA1O60232 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SSSCA1O60232 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.73■□□□□ 0.11
SSSCA1O60232 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.73■□□□□ 0.11
SSSCA1O60232 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.73■□□□□ 0.11
SSSCA1O60232 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 AL031598.1-201ENST00000561511 1773 ntBASIC15.73■□□□□ 0.11
SSSCA1O60232 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.73■□□□□ 0.11
SSSCA1O60232 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC15.73■□□□□ 0.11
SSSCA1O60232 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 STOX2-205ENST00000513034 807 ntTSL 3 BASIC15.73■□□□□ 0.11
SSSCA1O60232 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 UBE2DNL-204ENST00000602536 740 ntBASIC15.73■□□□□ 0.11
SSSCA1O60232 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
SSSCA1O60232 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SSSCA1O60232 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.73■□□□□ 0.11
SSSCA1O60232 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
SSSCA1O60232 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
SSSCA1O60232 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 Z98044.1-201ENST00000632503 1764 ntBASIC15.72■□□□□ 0.11
SSSCA1O60232 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms