Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.62■□□□□ 0.73
KDELR3O43731 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.62■□□□□ 0.73
KDELR3O43731 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.62■□□□□ 0.73
KDELR3O43731 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.62■□□□□ 0.73
KDELR3O43731 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.62■□□□□ 0.73
KDELR3O43731 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KDELR3O43731 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDELR3O43731 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.61■□□□□ 0.73
KDELR3O43731 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDELR3O43731 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDELR3O43731 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.61■□□□□ 0.73
KDELR3O43731 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.61■□□□□ 0.73
KDELR3O43731 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDELR3O43731 UNC93B2-201ENST00000285383 730 ntBASIC19.61■□□□□ 0.73
KDELR3O43731 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
KDELR3O43731 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KDELR3O43731 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
KDELR3O43731 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KDELR3O43731 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.61■□□□□ 0.73
KDELR3O43731 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.61■□□□□ 0.73
KDELR3O43731 AP000692.2-201ENST00000608391 879 ntBASIC19.61■□□□□ 0.73
KDELR3O43731 DGCR10-201ENST00000609839 495 ntBASIC19.61■□□□□ 0.73
KDELR3O43731 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.61■□□□□ 0.73
KDELR3O43731 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.61■□□□□ 0.73
KDELR3O43731 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.61■□□□□ 0.73
KDELR3O43731 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KDELR3O43731 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.61■□□□□ 0.73
KDELR3O43731 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
KDELR3O43731 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.61■□□□□ 0.73
KDELR3O43731 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDELR3O43731 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.61■□□□□ 0.73
KDELR3O43731 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDELR3O43731 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KDELR3O43731 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.61■□□□□ 0.73
KDELR3O43731 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.6■□□□□ 0.73
KDELR3O43731 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.6■□□□□ 0.73
KDELR3O43731 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.6■□□□□ 0.73
KDELR3O43731 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.6■□□□□ 0.73
KDELR3O43731 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.6■□□□□ 0.73
KDELR3O43731 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
KDELR3O43731 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 FAM207BP-201ENST00000447172 505 ntBASIC19.6■□□□□ 0.73
KDELR3O43731 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.6■□□□□ 0.73
KDELR3O43731 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.6■□□□□ 0.73
KDELR3O43731 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.6■□□□□ 0.73
KDELR3O43731 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
KDELR3O43731 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
KDELR3O43731 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 AC093484.2-201ENST00000580996 2166 ntBASIC19.6■□□□□ 0.73
KDELR3O43731 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KDELR3O43731 SLC25A24-204ENST00000569674 2357 ntBASIC19.59■□□□□ 0.73
KDELR3O43731 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KDELR3O43731 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KDELR3O43731 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.59■□□□□ 0.73
KDELR3O43731 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
KDELR3O43731 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
KDELR3O43731 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
KDELR3O43731 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.59■□□□□ 0.73
KDELR3O43731 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.59■□□□□ 0.73
KDELR3O43731 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KDELR3O43731 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.59■□□□□ 0.73
KDELR3O43731 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.59■□□□□ 0.73
KDELR3O43731 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KDELR3O43731 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KDELR3O43731 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KDELR3O43731 AC079598.2-202ENST00000546624 1451 ntBASIC19.59■□□□□ 0.73
KDELR3O43731 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
KDELR3O43731 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
KDELR3O43731 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KDELR3O43731 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
KDELR3O43731 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
KDELR3O43731 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KDELR3O43731 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
KDELR3O43731 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
KDELR3O43731 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KDELR3O43731 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
KDELR3O43731 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
KDELR3O43731 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.58■□□□□ 0.72
KDELR3O43731 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.58■□□□□ 0.72
KDELR3O43731 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.58■□□□□ 0.72
KDELR3O43731 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KDELR3O43731 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.58■□□□□ 0.72
KDELR3O43731 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms