Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MSI1O43347 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.08■□□□□ 0.8
MSI1O43347 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MSI1O43347 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MSI1O43347 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MSI1O43347 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MSI1O43347 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MSI1O43347 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
MSI1O43347 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.07■□□□□ 0.8
MSI1O43347 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.07■□□□□ 0.8
MSI1O43347 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.07■□□□□ 0.8
MSI1O43347 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.07■□□□□ 0.8
MSI1O43347 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.07■□□□□ 0.8
MSI1O43347 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.07■□□□□ 0.8
MSI1O43347 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.07■□□□□ 0.8
MSI1O43347 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
MSI1O43347 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.07■□□□□ 0.8
MSI1O43347 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
MSI1O43347 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.07■□□□□ 0.8
MSI1O43347 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MSI1O43347 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.06■□□□□ 0.8
MSI1O43347 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSI1O43347 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSI1O43347 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.06■□□□□ 0.8
MSI1O43347 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSI1O43347 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MSI1O43347 UNC93B2-201ENST00000285383 730 ntBASIC20.06■□□□□ 0.8
MSI1O43347 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.06■□□□□ 0.8
MSI1O43347 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.06■□□□□ 0.8
MSI1O43347 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
MSI1O43347 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
MSI1O43347 AC004951.3-201ENST00000418645 1148 ntBASIC20.06■□□□□ 0.8
MSI1O43347 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
MSI1O43347 AC091390.4-202ENST00000476426 537 ntBASIC20.06■□□□□ 0.8
MSI1O43347 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.06■□□□□ 0.8
MSI1O43347 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.06■□□□□ 0.8
MSI1O43347 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.06■□□□□ 0.8
MSI1O43347 AC073912.3-201ENST00000624414 853 ntBASIC20.06■□□□□ 0.8
MSI1O43347 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSI1O43347 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
MSI1O43347 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MSI1O43347 KRT8P41-201ENST00000533985 1514 ntBASIC20.06■□□□□ 0.8
MSI1O43347 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
MSI1O43347 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.05■□□□□ 0.8
MSI1O43347 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
MSI1O43347 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 KRT8P9-201ENST00000558927 1449 ntBASIC20.05■□□□□ 0.8
MSI1O43347 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.05■□□□□ 0.8
MSI1O43347 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.05■□□□□ 0.8
MSI1O43347 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 MIR1238-201ENST00000408483 83 ntBASIC20.05■□□□□ 0.8
MSI1O43347 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 AC130371.2-201ENST00000619443 611 ntBASIC20.05■□□□□ 0.8
MSI1O43347 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.05■□□□□ 0.8
MSI1O43347 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
MSI1O43347 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.05■□□□□ 0.8
MSI1O43347 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
MSI1O43347 Z82202.1-201ENST00000623446 1880 ntBASIC20.05■□□□□ 0.8
MSI1O43347 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.05■□□□□ 0.8
MSI1O43347 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MSI1O43347 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
MSI1O43347 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.04■□□□□ 0.8
MSI1O43347 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
MSI1O43347 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.04■□□□□ 0.8
MSI1O43347 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSI1O43347 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSI1O43347 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSI1O43347 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.04■□□□□ 0.8
MSI1O43347 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.04■□□□□ 0.8
MSI1O43347 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.04■□□□□ 0.8
MSI1O43347 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSI1O43347 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
MSI1O43347 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSI1O43347 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSI1O43347 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MSI1O43347 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.04■□□□□ 0.8
MSI1O43347 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
MSI1O43347 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms