Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC27.34■■□□□ 1.97
VGFO15240 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC27.34■■□□□ 1.97
VGFO15240 AC069148.1-201ENST00000608741 768 ntBASIC27.34■■□□□ 1.97
VGFO15240 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
VGFO15240 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
VGFO15240 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC27.34■■□□□ 1.97
VGFO15240 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
VGFO15240 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
VGFO15240 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC27.34■■□□□ 1.97
VGFO15240 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
VGFO15240 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
VGFO15240 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC27.34■■□□□ 1.97
VGFO15240 GABARAPL3-202ENST00000624044 1851 ntBASIC27.34■■□□□ 1.97
VGFO15240 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC27.33■■□□□ 1.97
VGFO15240 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
VGFO15240 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC27.33■■□□□ 1.97
VGFO15240 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC27.33■■□□□ 1.97
VGFO15240 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
VGFO15240 DUSP5P1-201ENST00000441325 1139 ntBASIC27.33■■□□□ 1.97
VGFO15240 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC27.33■■□□□ 1.97
VGFO15240 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC27.33■■□□□ 1.97
VGFO15240 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
VGFO15240 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC27.33■■□□□ 1.97
VGFO15240 AL391422.3-201ENST00000603791 2761 ntBASIC27.33■■□□□ 1.97
VGFO15240 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC27.33■■□□□ 1.97
VGFO15240 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC27.33■■□□□ 1.97
VGFO15240 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
VGFO15240 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
VGFO15240 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
VGFO15240 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.96
VGFO15240 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
VGFO15240 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC27.32■■□□□ 1.96
VGFO15240 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC27.32■■□□□ 1.96
VGFO15240 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
VGFO15240 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
VGFO15240 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC27.32■■□□□ 1.96
VGFO15240 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC27.32■■□□□ 1.96
VGFO15240 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC27.32■■□□□ 1.96
VGFO15240 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
VGFO15240 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
VGFO15240 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
VGFO15240 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC27.31■■□□□ 1.96
VGFO15240 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC27.31■■□□□ 1.96
VGFO15240 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC27.31■■□□□ 1.96
VGFO15240 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
VGFO15240 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
VGFO15240 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
VGFO15240 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
VGFO15240 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
VGFO15240 ILF2-202ENST00000368681 726 ntTSL 2 BASIC27.31■■□□□ 1.96
VGFO15240 FXN-203ENST00000396366 922 ntTSL 2 BASIC27.31■■□□□ 1.96
VGFO15240 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC27.31■■□□□ 1.96
VGFO15240 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
VGFO15240 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC27.31■■□□□ 1.96
VGFO15240 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC27.31■■□□□ 1.96
VGFO15240 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC27.31■■□□□ 1.96
VGFO15240 CR769767.2-201ENST00000622735 460 ntBASIC27.31■■□□□ 1.96
VGFO15240 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
VGFO15240 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC27.31■■□□□ 1.96
VGFO15240 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
VGFO15240 LINC01311-201ENST00000565162 1445 ntBASIC27.31■■□□□ 1.96
VGFO15240 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
VGFO15240 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 IPPK-202ENST00000375522 882 ntTSL 3 BASIC27.3■■□□□ 1.96
VGFO15240 HCG4P8-203ENST00000443049 980 ntBASIC27.3■■□□□ 1.96
VGFO15240 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC27.3■■□□□ 1.96
VGFO15240 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC27.3■■□□□ 1.96
VGFO15240 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC27.3■■□□□ 1.96
VGFO15240 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC27.3■■□□□ 1.96
VGFO15240 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
VGFO15240 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC27.3■■□□□ 1.96
VGFO15240 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
VGFO15240 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
VGFO15240 GAD2-202ENST00000376248 680 ntTSL 5 BASIC27.29■■□□□ 1.96
VGFO15240 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC27.29■■□□□ 1.96
VGFO15240 SPDYE15P-201ENST00000424157 909 ntBASIC27.29■■□□□ 1.96
VGFO15240 WDR88-203ENST00000592765 651 ntTSL 5 BASIC27.29■■□□□ 1.96
VGFO15240 AL121894.2-201ENST00000602977 491 ntBASIC27.29■■□□□ 1.96
VGFO15240 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
VGFO15240 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC27.29■■□□□ 1.96
VGFO15240 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms