Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TSPAN4O14817 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TSPAN4O14817 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.18■□□□□ 0.18
TSPAN4O14817 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.18■□□□□ 0.18
TSPAN4O14817 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TSPAN4O14817 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.18■□□□□ 0.18
TSPAN4O14817 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TSPAN4O14817 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.18■□□□□ 0.18
TSPAN4O14817 MIR6084-201ENST00000622012 110 ntBASIC16.18■□□□□ 0.18
TSPAN4O14817 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.18■□□□□ 0.18
TSPAN4O14817 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TSPAN4O14817 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.18■□□□□ 0.18
TSPAN4O14817 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 Z82202.1-201ENST00000623446 1880 ntBASIC16.18■□□□□ 0.18
TSPAN4O14817 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TSPAN4O14817 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TSPAN4O14817 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TSPAN4O14817 AC018695.7-201ENST00000624587 2492 ntBASIC16.17■□□□□ 0.18
TSPAN4O14817 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TSPAN4O14817 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.17■□□□□ 0.18
TSPAN4O14817 AC123595.1-201ENST00000440769 1046 ntBASIC16.17■□□□□ 0.18
TSPAN4O14817 YBX1P1-201ENST00000445822 960 ntBASIC16.17■□□□□ 0.18
TSPAN4O14817 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.17■□□□□ 0.18
TSPAN4O14817 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TSPAN4O14817 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TSPAN4O14817 AC007225.1-201ENST00000566331 1836 ntBASIC16.17■□□□□ 0.18
TSPAN4O14817 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
TSPAN4O14817 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TSPAN4O14817 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TSPAN4O14817 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TSPAN4O14817 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TSPAN4O14817 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
TSPAN4O14817 AC067852.2-201ENST00000590513 2313 ntBASIC16.16■□□□□ 0.18
TSPAN4O14817 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
TSPAN4O14817 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.16■□□□□ 0.18
TSPAN4O14817 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.16■□□□□ 0.18
TSPAN4O14817 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TSPAN4O14817 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
TSPAN4O14817 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TSPAN4O14817 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TSPAN4O14817 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 CICP6-201ENST00000457191 2729 ntBASIC16.15■□□□□ 0.18
TSPAN4O14817 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TSPAN4O14817 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms