Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBFD1O14562 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBFD1O14562 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
UBFD1O14562 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.74■□□□□ 0.59
UBFD1O14562 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.74■□□□□ 0.59
UBFD1O14562 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.74■□□□□ 0.59
UBFD1O14562 KRT18P16-201ENST00000510337 1294 ntBASIC18.74■□□□□ 0.59
UBFD1O14562 AC120498.8-201ENST00000614275 531 ntBASIC18.74■□□□□ 0.59
UBFD1O14562 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UBFD1O14562 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UBFD1O14562 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.74■□□□□ 0.59
UBFD1O14562 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
UBFD1O14562 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBFD1O14562 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.73■□□□□ 0.59
UBFD1O14562 AL031598.1-201ENST00000561511 1773 ntBASIC18.73■□□□□ 0.59
UBFD1O14562 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
UBFD1O14562 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.73■□□□□ 0.59
UBFD1O14562 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.73■□□□□ 0.59
UBFD1O14562 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.73■□□□□ 0.59
UBFD1O14562 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.73■□□□□ 0.59
UBFD1O14562 AL138781.1-201ENST00000566567 1274 ntBASIC18.73■□□□□ 0.59
UBFD1O14562 AC060766.5-201ENST00000590539 871 ntBASIC18.73■□□□□ 0.59
UBFD1O14562 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.73■□□□□ 0.59
UBFD1O14562 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.73■□□□□ 0.59
UBFD1O14562 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBFD1O14562 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.73■□□□□ 0.59
UBFD1O14562 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
UBFD1O14562 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.73■□□□□ 0.59
UBFD1O14562 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.73■□□□□ 0.59
UBFD1O14562 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBFD1O14562 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBFD1O14562 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.72■□□□□ 0.59
UBFD1O14562 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.72■□□□□ 0.59
UBFD1O14562 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UBFD1O14562 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.72■□□□□ 0.59
UBFD1O14562 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.72■□□□□ 0.59
UBFD1O14562 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.72■□□□□ 0.59
UBFD1O14562 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UBFD1O14562 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.72■□□□□ 0.59
UBFD1O14562 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.72■□□□□ 0.59
UBFD1O14562 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.72■□□□□ 0.59
UBFD1O14562 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UBFD1O14562 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
UBFD1O14562 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.72■□□□□ 0.59
UBFD1O14562 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
UBFD1O14562 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBFD1O14562 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
UBFD1O14562 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
UBFD1O14562 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBFD1O14562 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.71■□□□□ 0.59
UBFD1O14562 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.71■□□□□ 0.59
UBFD1O14562 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms