Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.75■■□□□ 1.07
DDX39AO00148 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX39AO00148 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
DDX39AO00148 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 FAM207BP-201ENST00000447172 505 ntBASIC21.75■■□□□ 1.07
DDX39AO00148 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX39AO00148 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.75■■□□□ 1.07
DDX39AO00148 FITM1-202ENST00000559294 800 ntBASIC21.75■■□□□ 1.07
DDX39AO00148 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
DDX39AO00148 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.75■■□□□ 1.07
DDX39AO00148 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
DDX39AO00148 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
DDX39AO00148 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
DDX39AO00148 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
DDX39AO00148 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX39AO00148 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX39AO00148 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX39AO00148 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX39AO00148 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
DDX39AO00148 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX39AO00148 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX39AO00148 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.74■■□□□ 1.07
DDX39AO00148 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX39AO00148 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.74■■□□□ 1.07
DDX39AO00148 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX39AO00148 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX39AO00148 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX39AO00148 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX39AO00148 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.74■■□□□ 1.07
DDX39AO00148 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.74■■□□□ 1.07
DDX39AO00148 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
DDX39AO00148 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX39AO00148 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX39AO00148 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.73■■□□□ 1.07
DDX39AO00148 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX39AO00148 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
DDX39AO00148 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
DDX39AO00148 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
DDX39AO00148 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX39AO00148 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX39AO00148 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.73■■□□□ 1.07
DDX39AO00148 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
DDX39AO00148 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.73■■□□□ 1.07
DDX39AO00148 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX39AO00148 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX39AO00148 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
DDX39AO00148 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX39AO00148 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.73■■□□□ 1.07
DDX39AO00148 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
DDX39AO00148 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX39AO00148 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX39AO00148 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX39AO00148 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
DDX39AO00148 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.72■■□□□ 1.07
DDX39AO00148 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX39AO00148 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX39AO00148 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX39AO00148 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
DDX39AO00148 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
DDX39AO00148 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.72■■□□□ 1.07
DDX39AO00148 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.72■■□□□ 1.07
DDX39AO00148 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX39AO00148 AP000692.2-201ENST00000608391 879 ntBASIC21.72■■□□□ 1.07
DDX39AO00148 DGCR10-201ENST00000609839 495 ntBASIC21.72■■□□□ 1.07
DDX39AO00148 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.72■■□□□ 1.07
DDX39AO00148 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX39AO00148 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX39AO00148 AL158211.5-201ENST00000623583 2518 ntBASIC21.72■■□□□ 1.07
DDX39AO00148 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.72■■□□□ 1.07
DDX39AO00148 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX39AO00148 ZNF815P-204ENST00000434898 1737 ntBASIC21.72■■□□□ 1.07
DDX39AO00148 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
DDX39AO00148 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
DDX39AO00148 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
DDX39AO00148 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX39AO00148 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
DDX39AO00148 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
DDX39AO00148 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX39AO00148 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX39AO00148 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.71■■□□□ 1.07
DDX39AO00148 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX39AO00148 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX39AO00148 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms