Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BOLA2-SMG1P6H3BVE0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BOLA2-SMG1P6H3BVE0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BOLA2-SMG1P6H3BVE0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
BOLA2-SMG1P6H3BVE0 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.89■□□□□ 0.3
BOLA2-SMG1P6H3BVE0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
BOLA2-SMG1P6H3BVE0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
BOLA2-SMG1P6H3BVE0 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.3
BOLA2-SMG1P6H3BVE0 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AL136379.1-201ENST00000623471 2642 ntBASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AC093525.10-201ENST00000625130 1569 ntBASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.88■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 HYMAI-201ENST00000635591 3347 ntBASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AIRN-201ENST00000601203 4374 ntBASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AF131216.4-201ENST00000638924 1588 ntBASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AC103834.1-201ENST00000520383 144 ntBASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
BOLA2-SMG1P6H3BVE0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms