Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49D1C9J1S8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49D1C9J1S8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.35■□□□□ 0.69
TRIM49D1C9J1S8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM49D1C9J1S8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
TRIM49D1C9J1S8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49D1C9J1S8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM49D1C9J1S8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49D1C9J1S8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM49D1C9J1S8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 SDHAP1-207ENST00000440850 2000 ntBASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 AL390719.1-204ENST00000412397 1219 ntBASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 AC026271.2-201ENST00000428091 497 ntBASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 AC133552.2-202ENST00000575694 574 ntBASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM49D1C9J1S8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM49D1C9J1S8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM49D1C9J1S8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
TRIM49D1C9J1S8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.33■□□□□ 0.69
TRIM49D1C9J1S8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
TRIM49D1C9J1S8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TRIM49D1C9J1S8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TRIM49D1C9J1S8 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRIM49D1C9J1S8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 FP475955.4-201ENST00000623131 1990 ntBASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRIM49D1C9J1S8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 AL031598.1-201ENST00000561511 1773 ntBASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 AC104417.2-201ENST00000562989 1793 ntBASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 AC124283.5-201ENST00000624661 1809 ntBASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRIM49D1C9J1S8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 MKRN4P-201ENST00000444706 1521 ntBASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 BX276092.2-201ENST00000417668 665 ntBASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 AC073210.2-201ENST00000430369 194 ntBASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 AC005829.2-201ENST00000571422 1056 ntBASIC19.31■□□□□ 0.68
TRIM49D1C9J1S8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms