Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.23■□□□□ 0.35
TVP23AA6NH52 AC097658.1-201ENST00000475555 843 ntBASIC17.23■□□□□ 0.35
TVP23AA6NH52 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 AC098934.4-201ENST00000564127 592 ntBASIC17.23■□□□□ 0.35
TVP23AA6NH52 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 MIR4758-201ENST00000577688 71 ntBASIC17.23■□□□□ 0.35
TVP23AA6NH52 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TVP23AA6NH52 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.23■□□□□ 0.35
TVP23AA6NH52 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.22■□□□□ 0.35
TVP23AA6NH52 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TVP23AA6NH52 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TVP23AA6NH52 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 AL138781.1-201ENST00000566567 1274 ntBASIC17.21■□□□□ 0.35
TVP23AA6NH52 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.21■□□□□ 0.35
TVP23AA6NH52 MYC-209ENST00000641252 345 ntBASIC17.21■□□□□ 0.35
TVP23AA6NH52 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.21■□□□□ 0.35
TVP23AA6NH52 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TVP23AA6NH52 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TVP23AA6NH52 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.21■□□□□ 0.34
TVP23AA6NH52 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TVP23AA6NH52 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TVP23AA6NH52 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TVP23AA6NH52 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.2■□□□□ 0.34
TVP23AA6NH52 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TVP23AA6NH52 AC141586.3-201ENST00000562166 1838 ntBASIC17.2■□□□□ 0.34
TVP23AA6NH52 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TVP23AA6NH52 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TVP23AA6NH52 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TVP23AA6NH52 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TVP23AA6NH52 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TVP23AA6NH52 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.2■□□□□ 0.34
TVP23AA6NH52 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TVP23AA6NH52 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms