Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 AC233263.1-201ENST00000578059 224 ntBASIC21.28■■□□□ 1
TRIM49BA6NDI0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM49BA6NDI0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.28■■□□□ 1
TRIM49BA6NDI0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM49BA6NDI0 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM49BA6NDI0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM49BA6NDI0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM49BA6NDI0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM49BA6NDI0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM49BA6NDI0 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM49BA6NDI0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM49BA6NDI0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM49BA6NDI0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.27■■□□□ 1
TRIM49BA6NDI0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
TRIM49BA6NDI0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRIM49BA6NDI0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM49BA6NDI0 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 AP003097.1-201ENST00000530657 1135 ntBASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TRIM49BA6NDI0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.24■□□□□ 0.99
TRIM49BA6NDI0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms