Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
SHISA3A0PJX4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 ANO7L1-203ENST00000602586 1720 ntBASIC16.84■□□□□ 0.29
SHISA3A0PJX4 AC104417.2-201ENST00000562989 1793 ntBASIC16.84■□□□□ 0.29
SHISA3A0PJX4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.84■□□□□ 0.29
SHISA3A0PJX4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SHISA3A0PJX4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SHISA3A0PJX4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.83■□□□□ 0.29
SHISA3A0PJX4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SHISA3A0PJX4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 ABALON-201ENST00000629058 1903 ntBASIC16.83■□□□□ 0.28
SHISA3A0PJX4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHISA3A0PJX4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.82■□□□□ 0.28
SHISA3A0PJX4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms