Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC069236.1-201ENST00000604339 616 ntBASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC068880.1-201ENST00000507289 2297 ntBASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC005837.3-201ENST00000612163 286 ntBASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.42□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.41□□□□□ -0.1
TRBV6-1A0A0K0K1D8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms