Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 FSCN1P1-201ENST00000568912 1481 ntBASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 AC116562.2-201ENST00000507042 360 ntBASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 AP000525.1-201ENST00000608286 694 ntBASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IGHV4-28A0A0C4DH34 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV4-28A0A0C4DH34 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV4-28A0A0C4DH34 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV4-28A0A0C4DH34 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV4-28A0A0C4DH34 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.96□□□□□ -0.18
IGHV4-28A0A0C4DH34 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV4-28A0A0C4DH34 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV4-28A0A0C4DH34 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
IGHV4-28A0A0C4DH34 PCDHAC2-203ENST00000615316 3011 ntBASIC13.96□□□□□ -0.18
IGHV4-28A0A0C4DH34 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 B3GAT3P1-201ENST00000471720 806 ntBASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 RPS20-210ENST00000523936 899 ntTSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IGHV4-28A0A0C4DH34 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC079598.2-202ENST00000546624 1451 ntBASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 MIR1238-201ENST00000408483 83 ntBASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC087499.1-201ENST00000418141 1075 ntBASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 LINC01465-201ENST00000408887 1940 ntBASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
IGHV4-28A0A0C4DH34 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms