Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 RASA4DP-201ENST00000460726 1199 ntBASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 PRR29-207ENST00000580752 458 ntTSL 3 BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
LOC102724428A0A0B4J2F2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 SDHD-206ENST00000528182 754 ntTSL 3 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 MIR3652-201ENST00000579335 131 ntBASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC009237.14-201ENST00000609975 1594 ntBASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 AL691432.2-201ENST00000607222 2038 ntBASIC24.61■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 LINC00565-201ENST00000562710 2331 ntBASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 RN7SL510P-201ENST00000581311 263 ntBASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC092329.2-201ENST00000598402 547 ntBASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC020907.5-201ENST00000624372 1936 ntBASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.6■■□□□ 1.53
LOC102724428A0A0B4J2F2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC24.59■■□□□ 1.53
LOC102724428A0A0B4J2F2 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 PRELID1P1-202ENST00000567272 903 ntBASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.53
LOC102724428A0A0B4J2F2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
LOC102724428A0A0B4J2F2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
LOC102724428A0A0B4J2F2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.52
LOC102724428A0A0B4J2F2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.58■■□□□ 1.52
LOC102724428A0A0B4J2F2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
LOC102724428A0A0B4J2F2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LOC102724428A0A0B4J2F2 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
LOC102724428A0A0B4J2F2 FDX1P1-201ENST00000449115 551 ntBASIC24.57■■□□□ 1.52
LOC102724428A0A0B4J2F2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.57■■□□□ 1.52
LOC102724428A0A0B4J2F2 MIR3180-1-201ENST00000580374 94 ntBASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms