Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 MCRIP2P1-201ENST00000394346 511 ntBASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 MFSD11-216ENST00000590393 1141 ntBASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRAV18A0A075B6X5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 AL133373.2-201ENST00000623187 2828 ntBASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 AL031598.1-201ENST00000561511 1773 ntBASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TRAV18A0A075B6X5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 AL162412.1-201ENST00000567129 965 ntBASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 AC010536.3-201ENST00000620306 533 ntBASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV18A0A075B6X5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 AC105020.6-201ENST00000621523 1217 ntBASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 OR6D1P-202ENST00000641007 5290 ntBASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 Z98044.1-201ENST00000632503 1764 ntBASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV18A0A075B6X5 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAV18A0A075B6X5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms