Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
AP4B1Q9Y6B7 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 MTND5P3-201ENST00000438536 1800 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC006504.1-201ENST00000562493 3666 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 ATP5F1P4-201ENST00000397288 746 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 RN7SKP235-201ENST00000410662 305 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AL606495.1-201ENST00000422100 813 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 RPL29P29-201ENST00000448725 423 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 RPL7P55-201ENST00000450522 746 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC010618.1-201ENST00000469924 477 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC104689.1-201ENST00000473356 768 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 RPL21P47-201ENST00000483696 477 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC105137.1-201ENST00000484355 562 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 IGBP1P5-201ENST00000507524 1000 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC008628.1-201ENST00000508663 265 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC021146.1-201ENST00000511202 716 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 RNU4-60P-201ENST00000517239 135 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AP003049.1-201ENST00000529418 457 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 OR6C73P-201ENST00000546432 358 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 TVP23BP1-201ENST00000557500 617 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AL133457.1-201ENST00000564251 987 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC099489.2-201ENST00000574976 260 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC090312.2-201ENST00000582687 378 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 KPNA2P3-201ENST00000584190 848 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC083809.1-201ENST00000615051 472 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 AC008013.2-202ENST00000637965 364 ntBASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
AP4B1Q9Y6B7 XPOTP1-201ENST00000443317 2398 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 NSRP1P1-201ENST00000444067 1693 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 SNORA70.2-201ENST00000364506 135 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 RNU6-609P-201ENST00000365459 107 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AL049693.1-201ENST00000402760 611 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 MIR1183-201ENST00000408856 89 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 NRBF2P2-201ENST00000413087 861 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 RPL30P2-201ENST00000414021 291 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AL445183.3-201ENST00000414168 502 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AC019070.1-201ENST00000415008 1024 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AC008173.1-201ENST00000418901 264 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 MFSD13B-201ENST00000420133 1290 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 RPL23AP38-201ENST00000423801 469 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 MTCO1P43-201ENST00000431831 488 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 RPL37P1-201ENST00000432310 284 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 HMGB1P48-201ENST00000446155 598 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 HMGN2P21-201ENST00000447764 270 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 NUTF2P3-201ENST00000448540 384 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 MTCO3P16-201ENST00000454456 754 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 RPS20P32-201ENST00000456044 356 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 CYCSP20-201ENST00000473154 315 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AC041039.1-201ENST00000485656 536 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AC108475.1-201ENST00000507880 950 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AC026726.1-201ENST00000512859 601 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 MTCO1P30-201ENST00000515244 580 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AP003730.1-201ENST00000524605 285 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 PARP1P2-201ENST00000556806 195 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 ATP5F1P7-201ENST00000567330 760 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 MIR3939-201ENST00000582614 106 ntBASIC3.85□□□□□ -1.79
AP4B1Q9Y6B7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms