Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 HMGB3P21-201ENST00000452483 547 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AL136097.1-201ENST00000456945 913 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC245028.2-201ENST00000458673 253 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 SNORD5.1-201ENST00000458800 75 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC074198.2-201ENST00000508153 258 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC011411.1-201ENST00000509592 876 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 RN7SKP183-201ENST00000517169 324 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 PMS2P3-207ENST00000529061 717 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 CYCSP28-201ENST00000534284 321 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC022884.2-201ENST00000578535 580 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 MIR6780B-201ENST00000610307 79 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AL445363.3-201ENST00000623080 671 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC111152.1-202ENST00000635848 339 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 UOX-205ENST00000640983 544 ntTSL 4 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AC010325.3-201ENST00000641084 394 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 CUBNP3-201ENST00000457461 1784 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 AL731556.1-201ENST00000394628 3711 ntBASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
TRIM35Q9UPQ4 KPNA2P2-201ENST00000419546 1489 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC022819.1-201ENST00000563495 3910 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 RNA5SP485-201ENST00000365053 119 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 SNORA22C-201ENST00000384614 134 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC099535.1-201ENST00000408928 371 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 RNU6-1203P-201ENST00000410703 110 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 RNA5SP498-201ENST00000411342 120 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 COX6CP10-201ENST00000416832 224 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC012065.2-201ENST00000421295 375 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 NDUFB4P10-201ENST00000452541 359 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC105384.2-201ENST00000508433 640 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 SCARNA6.1-201ENST00000516989 238 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC073916.1-201ENST00000545095 130 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC023968.1-201ENST00000560719 475 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC006600.1-201ENST00000572529 153 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 MAGOH2P-202ENST00000584384 429 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AL031320.1-201ENST00000604177 357 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC009779.8-202ENST00000607990 932 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 uc_338.12-201ENST00000616344 181 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 CASC19-246ENST00000641625 1606 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 AC008669.1-201ENST00000565823 2178 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 CYP2G2P-201ENST00000594920 1485 ntBASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
TRIM35Q9UPQ4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC096664.2-201ENST00000411843 406 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 OSTCP4-201ENST00000424397 449 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 SUMO2P3-201ENST00000438311 288 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 AC011225.1-201ENST00000457751 369 ntBASIC8.37□□□□□ -1.07
TRIM35Q9UPQ4 CTSLP6-201ENST00000458273 1002 ntBASIC8.37□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms