Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AC004972.1-201ENST00000623934 2209 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 RHOT1P2-201ENST00000366423 333 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 SNORA18.3-201ENST00000384122 132 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 RPS20P1-201ENST00000434853 354 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AC010655.1-201ENST00000449336 292 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 AP002812.4-201ENST00000532139 286 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 HMGB1P6-201ENST00000569046 646 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 GDA-209ENST00000545168 5362 ntTSL 2 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 CR383658.2-201ENST00000547576 1525 ntBASIC2.76□□□□□ -1.97
CSMD1Q96PZ7 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 Y_RNA.508-201ENST00000384502 114 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 RPS24P12-201ENST00000402084 394 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 YWHAQP9-201ENST00000445891 512 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 WASF1P1-201ENST00000447560 1131 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 snoU13.15-201ENST00000459407 104 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AC084357.1-201ENST00000473404 255 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AC117440.1-201ENST00000474107 571 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 MIR513A2-201ENST00000385249 127 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AL691447.1-201ENST00000419456 387 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AC008549.1-201ENST00000512900 643 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AP002404.1-201ENST00000532005 451 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AP000873.5-201ENST00000533906 236 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AC023389.2-201ENST00000580031 955 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AL162713.1-201ENST00000604480 262 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AL162574.2-201ENST00000614618 657 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 AC090971.4-201ENST00000560291 1800 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 HSPE1P6-201ENST00000479457 291 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 RN7SKP244-201ENST00000516513 307 ntBASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.75□□□□□ -1.97
CSMD1Q96PZ7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 AL031736.2-201ENST00000426573 787 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 HMGB1P3-201ENST00000502802 616 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 AC233702.9-201ENST00000581528 203 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 AC007336.1-201ENST00000576365 3828 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 MIR512-1-201ENST00000384913 84 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 AC019097.1-201ENST00000424783 735 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 NPM1P17-201ENST00000479221 602 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 AC096638.2-201ENST00000434965 711 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 IGKV3-31-201ENST00000523109 329 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 AC104446.1-201ENST00000613728 1321 ntBASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CSMD1Q96PZ7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 MIR489-201ENST00000384923 84 ntBASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CSMD1Q96PZ7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms