Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC093799.2-201ENST00000610062 578 ntBASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 AC006329.2-201ENST00000611491 394 ntBASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 AC024257.5-201ENST00000612739 531 ntBASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 AC023158.2-201ENST00000614876 543 ntBASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 MIR6778-201ENST00000617912 73 ntBASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 AC091905.2-201ENST00000623143 306 ntBASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 NCLP2-201ENST00000416078 1462 ntBASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 AC027287.1-201ENST00000553115 1453 ntBASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 AL645568.2-201ENST00000432815 1337 ntBASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01561Q8N1V8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 RNA5SP52-201ENST00000362448 134 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 Y_RNA.25-201ENST00000362528 102 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 RNA5SP258-201ENST00000362750 119 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 RN7SKP162-201ENST00000363605 345 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 RN7SKP103-201ENST00000363848 320 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 RNU1-44P-201ENST00000384453 163 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 MIR93-201ENST00000385024 80 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 U3.30-201ENST00000391308 210 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 RNA5SP104-201ENST00000410989 118 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AL591848.1-201ENST00000413092 322 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC099677.1-201ENST00000420575 175 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 RPS29P14-201ENST00000431518 171 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 VDAC1P3-201ENST00000434069 851 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 HMGB1P12-201ENST00000438594 598 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC093155.1-201ENST00000440164 826 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC245047.2-201ENST00000441060 530 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 snoU13.24-201ENST00000458998 104 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC096571.1-202ENST00000506634 735 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 PPBPP1-201ENST00000510807 373 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 IGKV2D-19-201ENST00000523346 262 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 MED28P5-201ENST00000528254 438 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC069240.1-201ENST00000548774 375 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 EEF1B2P4-201ENST00000551398 348 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 GTF2IP8-201ENST00000560687 584 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 SNORD95-201ENST00000579879 68 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 MIR4691-201ENST00000583764 85 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 BNIP3P24-201ENST00000593398 557 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC020910.3-201ENST00000603701 874 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC020634.1-201ENST00000608701 549 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC009237.15-201ENST00000610252 501 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC104763.3-201ENST00000613765 618 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC092650.2-201ENST00000619984 902 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AP001486.2-201ENST00000561652 5113 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 AC066616.2-201ENST00000559334 1481 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 MTCO1P23-201ENST00000415223 1526 ntBASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01561Q8N1V8 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 AC135352.1-201ENST00000506173 1418 ntBASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 AC002546.1-201ENST00000588041 2504 ntBASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 RNU6-600P-201ENST00000362524 99 ntBASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 SNORA74A-201ENST00000364089 198 ntBASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 snoZ40.1-201ENST00000364540 72 ntBASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 SNORD6-201ENST00000365444 73 ntBASIC3.12□□□□□ -1.91
LINC01561Q8N1V8 U3.29-201ENST00000391296 212 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms