Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 STMN1P2-201ENST00000508435 439 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC116353.3-201ENST00000511215 249 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 RNU6-1225P-201ENST00000516336 65 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC005832.3-201ENST00000537929 631 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 DUXAP6-201ENST00000553858 601 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 RPL21P7-201ENST00000557463 483 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 GTF2IP8-201ENST00000560687 584 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC008687.2-201ENST00000597865 520 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC080013.3-201ENST00000606839 578 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AL451074.6-201ENST00000608512 729 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 MLECP1-201ENST00000615893 709 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC006338.2-201ENST00000616864 791 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC243756.2-201ENST00000618406 463 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC017037.3-201ENST00000625016 472 ntBASIC4.21□□□□□ -1.74
BEST3Q8N1M1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 NF1-214ENST00000490416 1329 ntTSL 3 BASIC4.21□□□□□ -1.74
BEST3Q8N1M1 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 RNA5SP509-201ENST00000364577 119 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 RNA5SP80-201ENST00000410475 111 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 CEACAMP8-201ENST00000413902 580 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC006960.1-201ENST00000419980 153 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC233981.1-201ENST00000423224 461 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 USP9YP11-201ENST00000427537 717 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 MTND5P25-201ENST00000430499 799 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 CBX1P1-201ENST00000440184 427 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 RPL21P134-201ENST00000453468 483 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 RPL23AP24-201ENST00000458203 385 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AP000563.1-201ENST00000490865 758 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 WBP1LP4-201ENST00000505043 344 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC025674.1-201ENST00000507074 324 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AP001189.2-201ENST00000527320 189 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 PARP1P2-201ENST00000556806 195 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AL132657.2-201ENST00000564417 358 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC093519.1-201ENST00000566109 298 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC022069.1-201ENST00000582910 658 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AL354760.1-201ENST00000608357 643 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC009318.3-201ENST00000616916 503 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 AC121761.2-201ENST00000617300 689 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 MIR4278-201ENST00000636094 69 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 XPOTP1-201ENST00000443317 2398 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 LINC01109-201ENST00000603837 3081 ntBASIC4.2□□□□□ -1.74
BEST3Q8N1M1 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
BEST3Q8N1M1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
BEST3Q8N1M1 RNU6-115P-201ENST00000364310 107 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 SNORA70.2-201ENST00000364506 135 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 RNU6-157P-201ENST00000383957 107 ntBASIC4.19□□□□□ -1.74
BEST3Q8N1M1 RNU6-146P-201ENST00000384602 108 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 120.2 ms