Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 MIR548AB-201ENST00000584917 84 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC133552.5-201ENST00000604266 540 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 Y_RNA.804-201ENST00000615262 101 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC002553.4-201ENST00000616896 331 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 BX005214.3-202ENST00000619809 325 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK3Q8IV63 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VRK3Q8IV63 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VRK3Q8IV63 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.87□□□□□ -1.63
VRK3Q8IV63 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
VRK3Q8IV63 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VRK3Q8IV63 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK3Q8IV63 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK3Q8IV63 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC100778.3-201ENST00000580060 1750 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 RN7SKP95-201ENST00000362860 303 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 RNA5SP123-201ENST00000363244 119 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 RNU6-501P-201ENST00000364072 100 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 SNORA70-201ENST00000384436 135 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 MT-TP-201ENST00000387461 68 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AL078599.1-201ENST00000402075 293 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 RNU6-77P-201ENST00000410554 91 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 RNU6-248P-201ENST00000410720 107 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC009237.2-201ENST00000421358 284 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 RPL31P54-201ENST00000429803 370 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC093716.1-201ENST00000435923 377 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 Z99127.3-201ENST00000448158 395 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 AL034418.1-201ENST00000448675 860 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AL356981.1-201ENST00000454879 684 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC013267.1-201ENST00000458227 267 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 AL672167.3-201ENST00000465951 960 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 RN7SL319P-201ENST00000480656 221 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC004453.1-201ENST00000487895 408 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC105031.1-201ENST00000518550 476 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC044860.2-201ENST00000561005 179 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC005730.3-201ENST00000583067 366 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 SEPT7P9-203ENST00000604116 343 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC091834.1-201ENST00000614543 472 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AP000648.2-201ENST00000624182 404 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 DCAF13P3-201ENST00000561147 1334 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.86□□□□□ -1.63
VRK3Q8IV63 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK3Q8IV63 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VRK3Q8IV63 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
VRK3Q8IV63 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.85□□□□□ -1.63
VRK3Q8IV63 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms