Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.85□□□□□ -1.47
RTP1P59025 BPTFP1-201ENST00000579209 492 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AP001004.1-201ENST00000582468 324 ntBASIC5.85□□□□□ -1.47
RTP1P59025 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC5.85□□□□□ -1.47
RTP1P59025 AC090578.1-201ENST00000604955 591 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AL627230.1-201ENST00000613077 211 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AL591926.8-201ENST00000616876 211 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AC119674.1-212ENST00000641155 993 ntBASIC5.85□□□□□ -1.47
RTP1P59025 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
RTP1P59025 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 AC092747.4-201ENST00000620519 1861 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 CCT8P1-201ENST00000413611 1657 ntBASIC5.85□□□□□ -1.47
RTP1P59025 AL121839.2-201ENST00000565058 6943 ntBASIC5.85□□□□□ -1.47
RTP1P59025 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RTP1P59025 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RTP1P59025 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.84□□□□□ -1.47
RTP1P59025 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.84□□□□□ -1.47
RTP1P59025 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RTP1P59025 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
RTP1P59025 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.84□□□□□ -1.47
RTP1P59025 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RTP1P59025 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.84□□□□□ -1.47
RTP1P59025 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.84□□□□□ -1.47
RTP1P59025 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.84□□□□□ -1.47
RTP1P59025 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.84□□□□□ -1.47
RTP1P59025 AC125336.1-201ENST00000508893 2827 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AC007996.1-201ENST00000620414 2821 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AC079741.1-201ENST00000321498 212 ntBASIC5.84□□□□□ -1.47
RTP1P59025 RNU6-839P-201ENST00000363347 108 ntBASIC5.84□□□□□ -1.47
RTP1P59025 RNU6-619P-201ENST00000365146 108 ntBASIC5.84□□□□□ -1.47
RTP1P59025 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.84□□□□□ -1.47
RTP1P59025 SNORA70.6-201ENST00000383934 134 ntBASIC5.84□□□□□ -1.47
RTP1P59025 MT-TL1-201ENST00000386347 75 ntBASIC5.84□□□□□ -1.47
RTP1P59025 RPL23AP47-201ENST00000408017 460 ntBASIC5.84□□□□□ -1.47
RTP1P59025 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.84□□□□□ -1.47
RTP1P59025 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.84□□□□□ -1.47
RTP1P59025 AIMP1P1-201ENST00000418670 937 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.84□□□□□ -1.47
RTP1P59025 AC007742.1-201ENST00000425789 329 ntBASIC5.84□□□□□ -1.47
RTP1P59025 SKP1P3-201ENST00000429280 487 ntBASIC5.84□□□□□ -1.47
RTP1P59025 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RTP1P59025 ELOCP26-201ENST00000436067 329 ntBASIC5.84□□□□□ -1.47
RTP1P59025 CYCSP11-201ENST00000436426 315 ntBASIC5.84□□□□□ -1.47
RTP1P59025 LARP1BP2-201ENST00000486594 519 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AHI1-208ENST00000488690 712 ntTSL 5 BASIC5.84□□□□□ -1.47
RTP1P59025 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
RTP1P59025 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
RTP1P59025 PTGES3P3-201ENST00000511479 482 ntBASIC5.84□□□□□ -1.47
RTP1P59025 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.84□□□□□ -1.47
RTP1P59025 RN7SKP260-201ENST00000516907 149 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.84□□□□□ -1.47
RTP1P59025 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC5.84□□□□□ -1.47
RTP1P59025 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.84□□□□□ -1.47
RTP1P59025 MIR3913-1-201ENST00000577744 102 ntBASIC5.84□□□□□ -1.47
RTP1P59025 KPNA2P3-201ENST00000584190 848 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.84□□□□□ -1.47
RTP1P59025 AC008814.1-201ENST00000603797 406 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AC233280.2-201ENST00000603917 1070 ntBASIC5.84□□□□□ -1.47
RTP1P59025 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.84□□□□□ -1.47
RTP1P59025 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RTP1P59025 MIR6780A-201ENST00000615089 68 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AC027807.2-201ENST00000616099 408 ntBASIC5.84□□□□□ -1.47
RTP1P59025 AL359697.1-201ENST00000624879 587 ntBASIC5.84□□□□□ -1.47
RTP1P59025 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RTP1P59025 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.84□□□□□ -1.47
RTP1P59025 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
RTP1P59025 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
RTP1P59025 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.48
RTP1P59025 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RTP1P59025 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
RTP1P59025 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
RTP1P59025 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
RTP1P59025 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
RTP1P59025 CASC19-280ENST00000642102 1351 ntBASIC5.83□□□□□ -1.48
RTP1P59025 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.83□□□□□ -1.48
RTP1P59025 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.83□□□□□ -1.48
RTP1P59025 SDAD1P1-202ENST00000524156 2051 ntBASIC5.83□□□□□ -1.48
RTP1P59025 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RTP1P59025 U3.3-201ENST00000362986 216 ntBASIC5.83□□□□□ -1.48
RTP1P59025 RNU6-532P-201ENST00000384318 107 ntBASIC5.83□□□□□ -1.48
RTP1P59025 RNU6-876P-201ENST00000391295 104 ntBASIC5.83□□□□□ -1.48
RTP1P59025 GLULP6-201ENST00000399502 913 ntBASIC5.83□□□□□ -1.48
RTP1P59025 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.83□□□□□ -1.48
RTP1P59025 EI24P4-201ENST00000423683 1078 ntBASIC5.83□□□□□ -1.48
RTP1P59025 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.83□□□□□ -1.48
RTP1P59025 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.83□□□□□ -1.48
RTP1P59025 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.83□□□□□ -1.48
RTP1P59025 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms