Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC009263.1-201ENST00000441193 1239 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 AL133547.1-201ENST00000448546 220 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 AL500522.2-201ENST00000448562 343 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC8P31273 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC8P31273 RPL36AP13-201ENST00000457490 317 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 AC104164.3-201ENST00000467363 1258 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC4.52□□□□□ -1.69
HOXC8P31273 MTATP6P22-201ENST00000507369 598 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC8P31273 KRT19P6-201ENST00000510983 209 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC8P31273 RN7SKP96-201ENST00000516948 297 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.52□□□□□ -1.69
HOXC8P31273 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC8P31273 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXC8P31273 SERPINE4P-201ENST00000554978 281 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.52□□□□□ -1.69
HOXC8P31273 MIR5685-201ENST00000579080 79 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 BNIP3P22-201ENST00000593399 556 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 AC013244.3-201ENST00000605614 388 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 MIR6868-201ENST00000611215 58 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 AC078880.5-201ENST00000617845 421 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.52□□□□□ -1.69
HOXC8P31273 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXC8P31273 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXC8P31273 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
HOXC8P31273 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC8P31273 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HOXC8P31273 AP001642.1-201ENST00000624727 2117 ntBASIC4.52□□□□□ -1.69
HOXC8P31273 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
HOXC8P31273 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HOXC8P31273 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HOXC8P31273 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.51□□□□□ -1.69
HOXC8P31273 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.51□□□□□ -1.69
HOXC8P31273 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC8P31273 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC8P31273 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC8P31273 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC8P31273 RNA5SP391-201ENST00000363456 119 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC8P31273 RNU6ATAC-201ENST00000408749 126 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 RNA5SP44-201ENST00000410446 133 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 RPS3AP25-201ENST00000411660 793 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC8P31273 AL691449.1-201ENST00000426570 421 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AL358472.1-201ENST00000431295 329 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 MTND1P26-201ENST00000440488 538 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.51□□□□□ -1.69
HOXC8P31273 HSFY3P-201ENST00000444242 1191 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC8P31273 snoU109.3-201ENST00000459477 145 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC8P31273 AC114322.1-201ENST00000506771 926 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AC110792.2-201ENST00000510278 224 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AC005351.1-201ENST00000511152 786 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 RNA5SP143-201ENST00000516936 115 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC8P31273 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC8P31273 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC8P31273 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC8P31273 YPEL5P3-201ENST00000547227 352 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.51□□□□□ -1.69
HOXC8P31273 AL161713.1-201ENST00000555538 145 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.51□□□□□ -1.69
HOXC8P31273 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.51□□□□□ -1.69
HOXC8P31273 AP000919.1-202ENST00000581139 1264 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AC011492.1-201ENST00000600023 315 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AC069431.2-201ENST00000604149 1099 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 SNORD91B-202ENST00000608459 222 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 MIR6075-201ENST00000620782 95 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AL354798.1-201ENST00000622505 329 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 AC126544.2-201ENST00000625174 749 ntBASIC4.51□□□□□ -1.69
HOXC8P31273 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC8P31273 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC8P31273 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
HOXC8P31273 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC8P31273 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
HOXC8P31273 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC8P31273 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 AP001486.2-201ENST00000561652 5113 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AL512646.1-201ENST00000269395 1077 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 SNORA71.3-201ENST00000362582 128 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 MIR195-201ENST00000385194 87 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HOXC8P31273 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HOXC8P31273 RPL22P22-201ENST00000395439 379 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 PTMAP2-201ENST00000397627 327 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 PRELID3BP11-201ENST00000414230 479 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.5□□□□□ -1.69
HOXC8P31273 AC241520.1-201ENST00000422654 1099 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC8P31273 FO393414.1-201ENST00000428697 1184 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 YWHAEP5-201ENST00000431545 765 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 RPL21P110-201ENST00000433345 446 ntBASIC4.5□□□□□ -1.69
HOXC8P31273 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.5□□□□□ -1.69
HOXC8P31273 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.5□□□□□ -1.69
HOXC8P31273 HMGB1P48-201ENST00000446155 598 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms