Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 RNU2-58P-201ENST00000516403 183 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 TGIF1P1-201ENST00000558095 802 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 VN1R85P-201ENST00000601587 426 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AL451086.1-201ENST00000605596 223 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC099676.1-201ENST00000608886 657 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 XIST_intron.1-201ENST00000619444 68 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC068831.8-201ENST00000620171 435 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC079684.1-201ENST00000621405 437 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AP003400.2-201ENST00000624036 666 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 AC006042.3-201ENST00000454684 1469 ntBASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
HLA-DRB4X5D2U9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC092326.2-201ENST00000624772 1561 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 SNORA73.2-201ENST00000364946 201 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 SKINT1L-201ENST00000401057 817 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 MTHFD2P2-201ENST00000407725 247 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 RN7SKP156-201ENST00000410308 342 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 CASKP1-201ENST00000412870 582 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 HMGB3P20-201ENST00000417997 600 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AL691447.1-201ENST00000419456 387 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 NIPA2P1-201ENST00000426223 976 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 GAPDHP36-201ENST00000480688 918 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 RN7SKP289-201ENST00000517244 295 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 OR7E13P-201ENST00000526052 910 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC011602.1-201ENST00000546484 331 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 TRAV37-201ENST00000553906 342 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 HSPE1P5-201ENST00000561489 272 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 MIR5187-201ENST00000583479 76 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC024941.1-201ENST00000612250 334 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 MIR8058-201ENST00000615737 89 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 MIR4278-201ENST00000636094 69 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AP000553.6-201ENST00000641242 118 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AL118496.1-201ENST00000440201 1812 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 AC119744.1-201ENST00000454746 1715 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 ZNF826P-207ENST00000622273 1910 ntBASIC2.76□□□□□ -1.97
HLA-DRB4X5D2U9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 AL353746.1-201ENST00000566293 6881 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 SNORA57.1-201ENST00000391227 145 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 AC007064.3-201ENST00000422608 359 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 AC006989.1-201ENST00000427212 131 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 MTCYBP31-201ENST00000438855 1122 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 MRPS31P2-201ENST00000451581 518 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 AL133162.1-201ENST00000463228 453 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 AP002371.1-201ENST00000463604 433 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 RPS4XP22-201ENST00000480755 780 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 AC093267.1-201ENST00000489176 961 ntBASIC2.75□□□□□ -1.97
HLA-DRB4X5D2U9 RPL23AP73-201ENST00000492507 471 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms