Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC4.84□□□□□ -1.63
SSBP3Q9BWW4 AC099654.6-201ENST00000636487 512 ntBASIC4.84□□□□□ -1.63
SSBP3Q9BWW4 MIR193BHG-214ENST00000641765 509 ntBASIC4.84□□□□□ -1.63
SSBP3Q9BWW4 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SSBP3Q9BWW4 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SSBP3Q9BWW4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC4.84□□□□□ -1.63
SSBP3Q9BWW4 AC239868.2-201ENST00000564237 4527 ntBASIC4.84□□□□□ -1.63
SSBP3Q9BWW4 AC005261.2-201ENST00000593427 4258 ntBASIC4.84□□□□□ -1.64
SSBP3Q9BWW4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.84□□□□□ -1.64
SSBP3Q9BWW4 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSBP3Q9BWW4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC4.84□□□□□ -1.64
SSBP3Q9BWW4 AC130304.1-201ENST00000622942 2385 ntBASIC4.84□□□□□ -1.64
SSBP3Q9BWW4 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SSBP3Q9BWW4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
SSBP3Q9BWW4 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
SSBP3Q9BWW4 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 NLRP3P1-201ENST00000622303 1785 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 OR5P1P-201ENST00000299512 925 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 SNORD1C-201ENST00000363315 78 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RNU4-7P-201ENST00000364758 141 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RNU1-39P-201ENST00000383897 165 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RN7SKP266-201ENST00000410232 287 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC127391.1-201ENST00000411737 98 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC009161.1-201ENST00000417306 376 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AL161631.1-201ENST00000417933 486 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC092634.6-201ENST00000418558 192 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AL391987.1-201ENST00000441025 200 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC092809.1-201ENST00000441469 474 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC064862.4-201ENST00000442180 334 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 MTCO1P27-201ENST00000448269 226 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 PPIAP20-201ENST00000449839 135 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 NDUFA5P7-201ENST00000452914 242 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RNU6-261P-201ENST00000459506 102 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RN7SL174P-201ENST00000475578 289 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RPL38P3-201ENST00000484463 213 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC012123.2-201ENST00000485809 248 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 MIR2117-201ENST00000516780 80 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC087241.2-201ENST00000535801 324 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 IGBP1P1-201ENST00000554337 1009 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AL109766.1-201ENST00000555080 552 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC010547.6-201ENST00000571789 193 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC243773.3-201ENST00000613270 256 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AL133173.2-201ENST00000614270 90 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RN7SL544P-201ENST00000617232 284 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC018926.3-201ENST00000618841 406 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC009248.2-201ENST00000619826 254 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC068831.8-201ENST00000620171 435 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RN7SL763P-201ENST00000620922 284 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC069234.4-201ENST00000621276 412 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC007792.1-201ENST00000623023 402 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC021106.3-201ENST00000623925 531 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SSBP3Q9BWW4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms