Protein–RNA interactions for Protein: Q9BQP9

BPIFA3, BPI fold-containing family A member 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BPIFA3Q9BQP9 FP236240.3-201ENST00000623061 327 ntBASIC3.99□□□□□ -1.77
BPIFA3Q9BQP9 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
BPIFA3Q9BQP9 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
BPIFA3Q9BQP9 PWAR6-201ENST00000552334 4618 ntBASIC3.99□□□□□ -1.77
BPIFA3Q9BQP9 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 RN7SKP177-201ENST00000410567 355 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 MTND2P15-201ENST00000418575 892 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 XKRYP6-201ENST00000440468 1116 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 XKRYP3-201ENST00000442113 1116 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AL357552.1-201ENST00000445254 415 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AC010468.1-201ENST00000461022 817 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 RPS7P7-201ENST00000463499 571 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AC007537.2-201ENST00000472093 511 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AP000563.1-201ENST00000490865 758 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 TPT1P3-201ENST00000492841 512 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AC091917.2-201ENST00000505002 744 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 HMGB1P47-201ENST00000511281 589 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AC108064.1-201ENST00000513791 460 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 TOMM20P2-201ENST00000540082 421 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AC116651.1-201ENST00000609724 556 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AC004943.3-201ENST00000624116 600 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 AC073342.3-201ENST00000624211 193 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
BPIFA3Q9BQP9 MTND4P31-201ENST00000425607 1343 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 RNU6-452P-201ENST00000384406 107 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 CCNB2P1-201ENST00000399411 1150 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 SKINT1L-201ENST00000401057 817 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 RNA5SP317-201ENST00000410176 116 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 RNA5SP311-201ENST00000411290 116 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC004022.2-201ENST00000413824 193 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 RPS7P13-201ENST00000413955 498 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC245054.1-201ENST00000420944 258 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AL606490.8-201ENST00000441624 319 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AP002345.1-201ENST00000456493 928 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 RNA5SP315-201ENST00000516340 116 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 RNA5SP312-201ENST00000517068 116 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC115085.1-201ENST00000588924 229 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AP003117.1-201ENST00000602771 554 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 MIR6716-201ENST00000613413 80 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 MIR6730-201ENST00000622213 67 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 AC106871.1-201ENST00000568324 3102 ntBASIC3.97□□□□□ -1.77
BPIFA3Q9BQP9 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
BPIFA3Q9BQP9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
BPIFA3Q9BQP9 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
BPIFA3Q9BQP9 AC053481.2-202ENST00000582394 1500 ntBASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 SNORA62-201ENST00000365493 153 ntBASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 MIR124-3-201ENST00000384866 87 ntBASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 RANP4-201ENST00000413361 655 ntBASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 AL139247.1-201ENST00000422768 325 ntBASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 OR8F1P-201ENST00000425243 930 ntBASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 AC017083.1-201ENST00000428093 483 ntBASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.96□□□□□ -1.78
BPIFA3Q9BQP9 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms