Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 SYT14P1-201ENST00000481459 721 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 RN7SKP209-201ENST00000516888 304 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AC099489.2-201ENST00000574976 260 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 MIR3158-1-201ENST00000583596 81 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 BNIP3P40-201ENST00000596017 556 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AC097504.2-201ENST00000608088 454 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AL391497.1-201ENST00000608671 547 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AC004241.3-201ENST00000611728 517 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AC074140.1-201ENST00000621617 208 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SIN3AQ96ST3 AP000553.6-201ENST00000641242 118 ntBASIC5.29□□□□□ -1.56
SIN3AQ96ST3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 MIR16-2-201ENST00000362117 81 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 BMS1P3-201ENST00000372011 932 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 RNU6-1263P-201ENST00000384601 106 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AL160175.1-201ENST00000428124 247 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AL096829.2-201ENST00000446582 742 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AL133547.1-201ENST00000448546 220 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 MTATP6P14-201ENST00000455189 673 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AC018635.1-201ENST00000468292 1030 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 RN7SKP83-201ENST00000516512 178 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AP003355.1-201ENST00000518956 587 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AC092747.2-201ENST00000545069 983 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AC006133.1-201ENST00000617106 264 ntBASIC5.28□□□□□ -1.56
SIN3AQ96ST3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SIN3AQ96ST3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AP000568.1-201ENST00000282964 442 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 RNU6-796P-201ENST00000391086 107 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AC091286.1-201ENST00000431233 461 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 CALM1P2-201ENST00000452941 448 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AL133477.1-201ENST00000457472 514 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AC084357.1-201ENST00000473404 255 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 HMGB3P13-201ENST00000511263 607 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 SNORD39.2-201ENST00000579995 76 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AL163642.2-201ENST00000604722 1019 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AC026741.1-201ENST00000605892 482 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 AC112503.2-201ENST00000609005 552 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 FAM35DP-201ENST00000323387 2712 ntBASIC5.27□□□□□ -1.57
SIN3AQ96ST3 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SIN3AQ96ST3 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 RNA5SP42-201ENST00000364278 115 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 ATP5F1P3-201ENST00000397213 657 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 ZNF603P-201ENST00000405613 487 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 RNU6ATAC-201ENST00000408749 126 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 ATP5A1P2-201ENST00000412323 255 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 TATDN1P1-201ENST00000414123 891 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AL158825.1-201ENST00000414735 521 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 SKP1P1-201ENST00000438081 489 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 HMGB1P5-202ENST00000451497 985 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 RNU6-415P-201ENST00000516252 97 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AC008489.1-201ENST00000524271 483 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AC087888.1-201ENST00000550884 1254 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AL133457.1-201ENST00000564251 987 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.26□□□□□ -1.57
SIN3AQ96ST3 MIR1254-2-201ENST00000579553 63 ntBASIC5.26□□□□□ -1.57
SIN3AQ96ST3 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms