Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM6P62312 RN7SL132P-201ENST00000478131 296 ntBASIC3.29□□□□□ -1.88
LSM6P62312 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM6P62312 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.29□□□□□ -1.88
LSM6P62312 HIGD1AP5-201ENST00000529959 259 ntBASIC3.29□□□□□ -1.88
LSM6P62312 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
LSM6P62312 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM6P62312 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.29□□□□□ -1.88
LSM6P62312 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM6P62312 CENPUP2-201ENST00000555897 1186 ntBASIC3.29□□□□□ -1.88
LSM6P62312 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.29□□□□□ -1.88
LSM6P62312 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM6P62312 AC022146.1-201ENST00000595307 847 ntBASIC3.29□□□□□ -1.88
LSM6P62312 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 AC005344.1-201ENST00000613391 459 ntBASIC3.29□□□□□ -1.88
LSM6P62312 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.29□□□□□ -1.88
LSM6P62312 AL354798.1-201ENST00000622505 329 ntBASIC3.29□□□□□ -1.88
LSM6P62312 FP236240.3-201ENST00000623061 327 ntBASIC3.29□□□□□ -1.88
LSM6P62312 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM6P62312 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM6P62312 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM6P62312 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
LSM6P62312 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
LSM6P62312 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.29□□□□□ -1.88
LSM6P62312 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM6P62312 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM6P62312 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM6P62312 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM6P62312 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM6P62312 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM6P62312 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.28□□□□□ -1.88
LSM6P62312 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
LSM6P62312 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
LSM6P62312 HMGB1P10-201ENST00000395823 563 ntBASIC3.28□□□□□ -1.88
LSM6P62312 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM6P62312 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM6P62312 AL591419.1-201ENST00000427423 339 ntBASIC3.28□□□□□ -1.88
LSM6P62312 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.28□□□□□ -1.88
LSM6P62312 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM6P62312 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM6P62312 CBX1P4-201ENST00000439415 457 ntBASIC3.28□□□□□ -1.88
LSM6P62312 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM6P62312 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM6P62312 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM6P62312 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.28□□□□□ -1.88
LSM6P62312 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM6P62312 RPS20P21-201ENST00000466859 343 ntBASIC3.28□□□□□ -1.88
LSM6P62312 AC022034.3-201ENST00000471393 478 ntBASIC3.28□□□□□ -1.88
LSM6P62312 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM6P62312 RPL23AP73-201ENST00000492507 471 ntBASIC3.28□□□□□ -1.88
LSM6P62312 PTGES3P3-201ENST00000511479 482 ntBASIC3.28□□□□□ -1.88
LSM6P62312 SCARNA14-201ENST00000516903 136 ntBASIC3.28□□□□□ -1.88
LSM6P62312 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM6P62312 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.28□□□□□ -1.88
LSM6P62312 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM6P62312 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM6P62312 KLKP1-201ENST00000595979 403 ntBASIC3.28□□□□□ -1.88
LSM6P62312 AC006254.3-201ENST00000603353 884 ntBASIC3.28□□□□□ -1.88
LSM6P62312 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM6P62312 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.28□□□□□ -1.88
LSM6P62312 MIR8058-201ENST00000615737 89 ntBASIC3.28□□□□□ -1.88
LSM6P62312 MIR6875-201ENST00000617506 72 ntBASIC3.28□□□□□ -1.88
LSM6P62312 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM6P62312 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.28□□□□□ -1.88
LSM6P62312 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LSM6P62312 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
LSM6P62312 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.28□□□□□ -1.88
LSM6P62312 AP004289.2-201ENST00000444413 1457 ntBASIC3.28□□□□□ -1.88
LSM6P62312 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 AL359715.4-201ENST00000606629 1436 ntBASIC3.27□□□□□ -1.89
LSM6P62312 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 FAM91A3P-201ENST00000456826 2544 ntBASIC3.27□□□□□ -1.89
LSM6P62312 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
LSM6P62312 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
LSM6P62312 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.27□□□□□ -1.89
LSM6P62312 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM6P62312 AL590704.1-201ENST00000402856 794 ntBASIC3.27□□□□□ -1.89
LSM6P62312 MTCO3P31-201ENST00000405526 789 ntBASIC3.27□□□□□ -1.89
LSM6P62312 Y_RNA.625-201ENST00000411256 107 ntBASIC3.27□□□□□ -1.89
LSM6P62312 HMGB3P20-201ENST00000417997 600 ntBASIC3.27□□□□□ -1.89
LSM6P62312 UBE2V2P1-201ENST00000434717 398 ntBASIC3.27□□□□□ -1.89
LSM6P62312 ELOCP11-201ENST00000436690 332 ntBASIC3.27□□□□□ -1.89
LSM6P62312 TXNP1-201ENST00000441872 371 ntBASIC3.27□□□□□ -1.89
LSM6P62312 ELOCP16-201ENST00000444494 332 ntBASIC3.27□□□□□ -1.89
LSM6P62312 MTCO3P16-201ENST00000454456 754 ntBASIC3.27□□□□□ -1.89
LSM6P62312 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.27□□□□□ -1.89
LSM6P62312 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.27□□□□□ -1.89
LSM6P62312 VN1R105P-201ENST00000486595 910 ntBASIC3.27□□□□□ -1.89
LSM6P62312 AC026784.1-201ENST00000507986 352 ntBASIC3.27□□□□□ -1.89
LSM6P62312 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms