Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.67□□□□□ -1.66
HDAC4P56524 AC007529.1-201ENST00000418574 2178 ntBASIC4.67□□□□□ -1.66
HDAC4P56524 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HDAC4P56524 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
HDAC4P56524 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC4P56524 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC4P56524 AL592148.3-201ENST00000608771 2646 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.66□□□□□ -1.66
HDAC4P56524 A2MP1-204ENST00000566278 4130 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC4P56524 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC4P56524 SNORA51.12-201ENST00000384448 134 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HDAC4P56524 MTCO2P31-201ENST00000402702 684 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 RNU2-65P-201ENST00000410162 185 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 Z75741.2-201ENST00000417272 1167 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC4P56524 AC062016.2-201ENST00000420950 676 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 PDSS1P1-201ENST00000422953 1114 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 RAC1P8-201ENST00000427086 527 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 HIGD1AP12-201ENST00000427832 281 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC4P56524 MOB1AP1-201ENST00000430903 535 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 NPM1P13-201ENST00000452663 865 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 RN7SL41P-201ENST00000476144 297 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AC090013.1-201ENST00000485147 480 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC4P56524 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC4P56524 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC4P56524 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC4P56524 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC4P56524 RNU6-416P-201ENST00000516265 103 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC4P56524 IGLVIV-53-201ENST00000520107 367 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC4P56524 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HDAC4P56524 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC4P56524 AC136624.4-201ENST00000573044 370 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.66□□□□□ -1.66
HDAC4P56524 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.66□□□□□ -1.66
HDAC4P56524 AC068790.5-201ENST00000602741 355 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AC069304.3-201ENST00000603938 1084 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AC008745.1-201ENST00000604064 271 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AL139286.1-201ENST00000604465 483 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AP000238.1-201ENST00000608759 426 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AC004908.3-201ENST00000610248 625 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 Z99129.2-201ENST00000619967 314 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HDAC4P56524 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
HDAC4P56524 RAD17P1-201ENST00000418130 2042 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC4P56524 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC4P56524 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.66□□□□□ -1.66
HDAC4P56524 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC4P56524 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC4P56524 AC119744.1-201ENST00000454746 1715 ntBASIC4.66□□□□□ -1.66
HDAC4P56524 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.66□□□□□ -1.66
HDAC4P56524 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC4P56524 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDAC4P56524 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.65□□□□□ -1.66
HDAC4P56524 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HDAC4P56524 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HDAC4P56524 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
HDAC4P56524 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
HDAC4P56524 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HDAC4P56524 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.65□□□□□ -1.67
HDAC4P56524 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HDAC4P56524 RNA5SP332-201ENST00000391063 115 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 RNU6-575P-201ENST00000411326 105 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.65□□□□□ -1.67
HDAC4P56524 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 AC119751.6-201ENST00000416712 186 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC4P56524 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 RPL30P3-201ENST00000424262 333 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 AL009174.1-201ENST00000426577 416 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 RPL23AP1-201ENST00000428990 471 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.65□□□□□ -1.67
HDAC4P56524 RPS6P12-201ENST00000432491 726 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC4P56524 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HDAC4P56524 ARL2BPP10-201ENST00000446487 531 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC4P56524 MRPL35P4-201ENST00000453682 566 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC4P56524 RPS23P7-201ENST00000466210 444 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 PRDX3P4-201ENST00000470828 747 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC4P56524 AC111000.3-201ENST00000508057 576 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.65□□□□□ -1.67
HDAC4P56524 AC090151.1-201ENST00000520784 730 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC4P56524 MTCO2P15-201ENST00000532655 656 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 OR5AN2P-201ENST00000534535 896 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 MTND3P13-201ENST00000574391 343 ntBASIC4.65□□□□□ -1.67
HDAC4P56524 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.65□□□□□ -1.67
HDAC4P56524 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms