Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNGA1P29973 RN7SKP100-201ENST00000411258 284 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 AC019178.2-201ENST00000423595 505 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.66□□□□□ -1.5
CNGA1P29973 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC5.66□□□□□ -1.5
CNGA1P29973 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.66□□□□□ -1.5
CNGA1P29973 RPL26P28-201ENST00000451325 435 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 TRGVB-201ENST00000453257 471 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 snoU13.7-201ENST00000459220 104 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 AC087879.1-201ENST00000474343 374 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 RPL12P20-201ENST00000475538 479 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC5.66□□□□□ -1.5
CNGA1P29973 AK3P4-201ENST00000504283 583 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.66□□□□□ -1.5
CNGA1P29973 AC097173.1-201ENST00000505862 819 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 MTCO3P28-201ENST00000513351 515 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.66□□□□□ -1.5
CNGA1P29973 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.66□□□□□ -1.5
CNGA1P29973 RNU6-583P-201ENST00000516012 92 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5.66□□□□□ -1.5
CNGA1P29973 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.66□□□□□ -1.5
CNGA1P29973 MTCO1P49-201ENST00000523429 802 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.66□□□□□ -1.5
CNGA1P29973 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.66□□□□□ -1.5
CNGA1P29973 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.66□□□□□ -1.5
CNGA1P29973 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CNGA1P29973 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNGA1P29973 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.66□□□□□ -1.5
CNGA1P29973 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.66□□□□□ -1.5
CNGA1P29973 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5.66□□□□□ -1.5
CNGA1P29973 MTCYBP28-201ENST00000566728 1132 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 MIR4277-201ENST00000578298 84 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNGA1P29973 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.66□□□□□ -1.5
CNGA1P29973 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.66□□□□□ -1.5
CNGA1P29973 AC090948.2-201ENST00000607363 564 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 AC006338.2-201ENST00000616864 791 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 AC068137.4-201ENST00000638485 296 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNGA1P29973 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.66□□□□□ -1.5
CNGA1P29973 LINC00561-201ENST00000565815 2738 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.66□□□□□ -1.5
CNGA1P29973 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNGA1P29973 AC112198.2-201ENST00000426589 6996 ntBASIC5.66□□□□□ -1.5
CNGA1P29973 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNGA1P29973 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.65□□□□□ -1.5
CNGA1P29973 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNGA1P29973 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CNGA1P29973 MTND5P28-201ENST00000438005 1594 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNGA1P29973 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.65□□□□□ -1.5
CNGA1P29973 RNA5SP223-201ENST00000365174 120 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 RN7SKP106-201ENST00000410832 272 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 USP9YP33-201ENST00000412220 421 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.65□□□□□ -1.5
CNGA1P29973 MTCYBP38-201ENST00000417160 1123 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 RPL17P36-201ENST00000420302 549 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 AL035407.1-201ENST00000429211 571 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 AC009238.2-201ENST00000431026 355 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 RPS20P1-201ENST00000434853 354 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 USP9YP35-201ENST00000435696 412 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 ELOCP8-201ENST00000439309 332 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 ELOCP15-201ENST00000442090 332 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 AC118469.1-201ENST00000442943 488 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.65□□□□□ -1.5
CNGA1P29973 AC010733.1-201ENST00000451515 401 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.65□□□□□ -1.5
CNGA1P29973 MTCO3P2-201ENST00000457365 171 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 OR4G11P-201ENST00000492842 939 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 AC108078.3-201ENST00000502633 489 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.65□□□□□ -1.5
CNGA1P29973 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.65□□□□□ -1.5
CNGA1P29973 AC090071.1-201ENST00000507713 644 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 AC110792.2-201ENST00000510278 224 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.65□□□□□ -1.5
CNGA1P29973 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.65□□□□□ -1.5
CNGA1P29973 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.65□□□□□ -1.5
CNGA1P29973 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CNGA1P29973 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CNGA1P29973 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.65□□□□□ -1.5
CNGA1P29973 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.65□□□□□ -1.5
CNGA1P29973 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CNGA1P29973 MIR4512-201ENST00000583257 77 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 AC040904.1-201ENST00000590850 223 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.65□□□□□ -1.5
CNGA1P29973 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.65□□□□□ -1.5
CNGA1P29973 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.65□□□□□ -1.5
CNGA1P29973 FP325313.1-201ENST00000638228 703 ntBASIC5.65□□□□□ -1.5
CNGA1P29973 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.65□□□□□ -1.51
CNGA1P29973 OR5BR1P-201ENST00000524992 1330 ntBASIC5.65□□□□□ -1.51
CNGA1P29973 AC011477.1-204ENST00000623416 1325 ntBASIC5.65□□□□□ -1.51
CNGA1P29973 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CNGA1P29973 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.65□□□□□ -1.51
CNGA1P29973 MTND5P24-201ENST00000438892 1767 ntBASIC5.65□□□□□ -1.51
CNGA1P29973 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CNGA1P29973 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CNGA1P29973 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.64□□□□□ -1.51
CNGA1P29973 ELL2P3-201ENST00000457883 1602 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms