Protein–RNA interactions for Protein: P16144

ITGB4, Integrin beta-4, humanhuman

Predictions only

Length 1,822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4P16144 RNU6-249P-201ENST00000363016 102 ntBASIC4.24□□□□□ -1.73
ITGB4P16144 SNORA80A-201ENST00000363922 136 ntBASIC4.24□□□□□ -1.73
ITGB4P16144 RNA5SP235-201ENST00000365411 114 ntBASIC4.24□□□□□ -1.73
ITGB4P16144 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.24□□□□□ -1.73
ITGB4P16144 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.24□□□□□ -1.73
ITGB4P16144 AP000942.1-201ENST00000463969 747 ntBASIC4.24□□□□□ -1.73
ITGB4P16144 AC026801.2-201ENST00000515352 425 ntBASIC4.24□□□□□ -1.73
ITGB4P16144 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.24□□□□□ -1.73
ITGB4P16144 PSMA2P1-201ENST00000526365 646 ntBASIC4.24□□□□□ -1.73
ITGB4P16144 AC113192.3-201ENST00000529152 742 ntBASIC4.24□□□□□ -1.73
ITGB4P16144 MIR2682-201ENST00000580305 110 ntBASIC4.24□□□□□ -1.73
ITGB4P16144 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.24□□□□□ -1.73
ITGB4P16144 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.24□□□□□ -1.73
ITGB4P16144 LINC02471-203ENST00000641941 4752 ntBASIC4.24□□□□□ -1.73
ITGB4P16144 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.24□□□□□ -1.73
ITGB4P16144 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ITGB4P16144 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
ITGB4P16144 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
ITGB4P16144 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
ITGB4P16144 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.24□□□□□ -1.73
ITGB4P16144 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ITGB4P16144 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ITGB4P16144 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.23□□□□□ -1.73
ITGB4P16144 USP9YP36-201ENST00000424581 829 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC002075.2-201ENST00000425207 252 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 RPL35AP12-201ENST00000425362 338 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 USP9YP31-201ENST00000431405 881 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC107083.1-201ENST00000439643 279 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AL356535.1-201ENST00000440335 398 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC099560.2-201ENST00000457554 255 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.23□□□□□ -1.73
ITGB4P16144 AC068724.1-201ENST00000487100 792 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.23□□□□□ -1.73
ITGB4P16144 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC4.23□□□□□ -1.73
ITGB4P16144 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.23□□□□□ -1.73
ITGB4P16144 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.23□□□□□ -1.73
ITGB4P16144 BRDTP1-201ENST00000605735 677 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC015813.4-201ENST00000610469 179 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.23□□□□□ -1.73
ITGB4P16144 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ITGB4P16144 AC093849.1-201ENST00000563631 2209 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.23□□□□□ -1.73
ITGB4P16144 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
ITGB4P16144 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.23□□□□□ -1.73
ITGB4P16144 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ITGB4P16144 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.23□□□□□ -1.73
ITGB4P16144 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.23□□□□□ -1.73
ITGB4P16144 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
ITGB4P16144 UBE2V1P2-201ENST00000397758 440 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 EEF1A1P41-201ENST00000414667 207 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 RANP7-201ENST00000418085 644 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.23□□□□□ -1.73
ITGB4P16144 NANOGP6-201ENST00000429190 847 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.23□□□□□ -1.73
ITGB4P16144 AC069499.1-201ENST00000489433 509 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC112184.1-201ENST00000505179 312 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC091826.1-201ENST00000514065 313 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 MYL12AP1-201ENST00000518490 515 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 KCTD9P6-201ENST00000522306 950 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.23□□□□□ -1.73
ITGB4P16144 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.23□□□□□ -1.73
ITGB4P16144 AP005205.1-201ENST00000563503 508 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.23□□□□□ -1.73
ITGB4P16144 MIR4513-201ENST00000581077 86 ntBASIC4.23□□□□□ -1.73
ITGB4P16144 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.23□□□□□ -1.73
ITGB4P16144 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.23□□□□□ -1.73
ITGB4P16144 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.23□□□□□ -1.73
ITGB4P16144 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.22□□□□□ -1.73
ITGB4P16144 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
ITGB4P16144 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGB4P16144 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGB4P16144 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGB4P16144 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
ITGB4P16144 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ITGB4P16144 MTND4LP20-201ENST00000402379 270 ntBASIC4.22□□□□□ -1.73
ITGB4P16144 RPS26P47-201ENST00000427219 348 ntBASIC4.22□□□□□ -1.73
ITGB4P16144 RPS26P3-201ENST00000470205 348 ntBASIC4.22□□□□□ -1.73
ITGB4P16144 AC004057.1-201ENST00000485827 348 ntBASIC4.22□□□□□ -1.73
ITGB4P16144 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC4.22□□□□□ -1.73
ITGB4P16144 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.22□□□□□ -1.73
ITGB4P16144 SCARNA20.6-201ENST00000517251 106 ntBASIC4.22□□□□□ -1.73
ITGB4P16144 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.22□□□□□ -1.73
ITGB4P16144 BNIP3P38-201ENST00000601117 544 ntBASIC4.22□□□□□ -1.73
ITGB4P16144 AC006023.1-201ENST00000603944 259 ntBASIC4.22□□□□□ -1.73
ITGB4P16144 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGB4P16144 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ITGB4P16144 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.22□□□□□ -1.73
ITGB4P16144 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.22□□□□□ -1.73
ITGB4P16144 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGB4P16144 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ITGB4P16144 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
ITGB4P16144 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
ITGB4P16144 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.73
ITGB4P16144 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
ITGB4P16144 AC019072.1-201ENST00000604535 1551 ntBASIC4.21□□□□□ -1.73
ITGB4P16144 SNORD67-201ENST00000390833 111 ntBASIC4.21□□□□□ -1.74
ITGB4P16144 SNORA79B-201ENST00000410557 148 ntBASIC4.21□□□□□ -1.74
ITGB4P16144 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ITGB4P16144 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.21□□□□□ -1.74
ITGB4P16144 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms