Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.17□□□□□ -1.74
ZIC3O60481 AL391684.1-202ENST00000641293 1636 ntBASIC4.17□□□□□ -1.74
ZIC3O60481 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ZIC3O60481 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
ZIC3O60481 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.16□□□□□ -1.74
ZIC3O60481 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 AL118496.1-201ENST00000440201 1812 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ZIC3O60481 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.16□□□□□ -1.74
ZIC3O60481 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 RNU6-251P-201ENST00000363235 104 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 RNU6-553P-201ENST00000364047 96 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 SNORA71.2-201ENST00000364941 134 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ZIC3O60481 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 MTCO3P31-201ENST00000405526 789 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 RPP40P1-201ENST00000426762 456 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 AC241584.1-201ENST00000438469 1241 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.16□□□□□ -1.74
ZIC3O60481 ARL4AP3-201ENST00000441452 574 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 ARL2BPP10-201ENST00000446487 531 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.16□□□□□ -1.74
ZIC3O60481 NDUFA5P7-201ENST00000452914 242 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.16□□□□□ -1.74
ZIC3O60481 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.16□□□□□ -1.74
ZIC3O60481 RN7SL459P-201ENST00000481078 302 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.16□□□□□ -1.74
ZIC3O60481 AK3P4-201ENST00000504283 583 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
ZIC3O60481 RNU6-759P-201ENST00000516740 103 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 RN7SKP96-201ENST00000516948 297 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.16□□□□□ -1.74
ZIC3O60481 AC027309.2-201ENST00000520566 192 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.16□□□□□ -1.74
ZIC3O60481 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 AC084783.1-201ENST00000565846 910 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 AC018552.3-201ENST00000567416 561 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.16□□□□□ -1.74
ZIC3O60481 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 AC069061.3-201ENST00000582254 823 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.16□□□□□ -1.74
ZIC3O60481 AC110743.1-201ENST00000584870 478 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 AC006539.2-201ENST00000601729 572 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 AC093765.1-201ENST00000603758 881 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 AL022161.1-201ENST00000604390 213 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.16□□□□□ -1.74
ZIC3O60481 AL354976.1-201ENST00000613843 387 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 MIR8069-1-201ENST00000616627 86 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 MIR8069-2-201ENST00000621412 86 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 AC010608.2-201ENST00000624830 470 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 AL049536.1-201ENST00000625043 744 ntBASIC4.16□□□□□ -1.74
ZIC3O60481 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ZIC3O60481 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.16□□□□□ -1.74
ZIC3O60481 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
ZIC3O60481 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.15□□□□□ -1.74
ZIC3O60481 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.74
ZIC3O60481 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.15□□□□□ -1.74
ZIC3O60481 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
ZIC3O60481 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.15□□□□□ -1.74
ZIC3O60481 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZIC3O60481 AC015813.6-201ENST00000624409 5808 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
ZIC3O60481 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 SDHCP2-201ENST00000398565 501 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.15□□□□□ -1.75
ZIC3O60481 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 RPEP3-201ENST00000425462 676 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 CENPIP1-201ENST00000425713 902 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 RPS26P47-201ENST00000427219 348 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 RPL31P54-201ENST00000429803 370 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 RPL34P6-201ENST00000432390 345 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 UBE2D3P4-201ENST00000441973 436 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 AC097262.1-201ENST00000452559 548 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 MTND3P7-201ENST00000474435 343 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 XKRY-201ENST00000510392 1100 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 SOD1P3-201ENST00000518682 454 ntBASIC4.15□□□□□ -1.75
ZIC3O60481 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.15□□□□□ -1.75
ZIC3O60481 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms