Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC000041.1-201ENST00000439655 175 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC28A1O00337 SEPT14P24-201ENST00000447236 180 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 HMGN1P5-201ENST00000448591 263 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC28A1O00337 HMGB3P22-202ENST00000451823 572 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC28A1O00337 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC28A1O00337 RNU7-140P-201ENST00000459546 60 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AC091959.2-201ENST00000477363 321 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 RPL21P103-201ENST00000479921 488 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC28A1O00337 RN7SKP277-201ENST00000516895 283 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 MTND1P6-201ENST00000523621 946 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC28A1O00337 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SLC28A1O00337 AC087894.1-201ENST00000538359 518 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC28A1O00337 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.93□□□□□ -1.78
SLC28A1O00337 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC28A1O00337 PSMB7P1-201ENST00000556349 514 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 EIF5A2P1-201ENST00000564027 460 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AC104072.1-201ENST00000568817 668 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 MTCO1P40-201ENST00000574371 625 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 BPTFP1-201ENST00000579209 492 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 MRPS35P3-201ENST00000603189 709 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AC013468.1-201ENST00000608680 598 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC28A1O00337 AC253576.2-201ENST00000618815 580 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AL359715.5-201ENST00000623431 443 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 MIR4496-201ENST00000635896 61 ntBASIC3.93□□□□□ -1.78
SLC28A1O00337 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC28A1O00337 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC28A1O00337 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SLC28A1O00337 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC28A1O00337 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SLC28A1O00337 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC28A1O00337 MAPK10-253ENST00000641010 4072 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 AC011978.2-201ENST00000569835 2054 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 FAM3C2-201ENST00000312214 681 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 SNORA60-201ENST00000362396 134 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 SNORA70E-201ENST00000384492 135 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 UBE2V1P9-201ENST00000414760 368 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 TAF13P2-201ENST00000416876 286 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC28A1O00337 UBE2V1P1-201ENST00000430836 445 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 ATP5HP2-201ENST00000433885 485 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 RPS7P2-201ENST00000435134 607 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC28A1O00337 CBX1P1-201ENST00000440184 427 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 RAB11AP1-201ENST00000442978 646 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 BX276092.4-201ENST00000452056 248 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AL049829.1-201ENST00000465411 156 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC018635.1-201ENST00000468292 1030 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC013356.1-201ENST00000489027 564 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC069499.1-201ENST00000489433 509 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC28A1O00337 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC28A1O00337 AC112198.4-201ENST00000515450 351 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC28A1O00337 AC006518.2-201ENST00000542513 940 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 CYB5AP5-201ENST00000549779 389 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC004217.3-201ENST00000551552 878 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.92□□□□□ -1.78
SLC28A1O00337 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.92□□□□□ -1.78
SLC28A1O00337 AC010735.1-201ENST00000567305 1026 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC022968.1-201ENST00000567372 442 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC025627.2-201ENST00000576220 160 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 ELOCP28-201ENST00000590044 317 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC114878.2-201ENST00000604863 1251 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC28A1O00337 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC28A1O00337 AL121594.5-201ENST00000631724 573 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 AC006927.2-201ENST00000639256 389 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC28A1O00337 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
SLC28A1O00337 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.92□□□□□ -1.78
SLC28A1O00337 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
SLC28A1O00337 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.92□□□□□ -1.78
SLC28A1O00337 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.92□□□□□ -1.78
SLC28A1O00337 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SLC28A1O00337 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC28A1O00337 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC28A1O00337 RNU5B-1-201ENST00000363286 116 ntBASIC3.91□□□□□ -1.78
SLC28A1O00337 RNU6-353P-201ENST00000364266 108 ntBASIC3.91□□□□□ -1.78
SLC28A1O00337 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
SLC28A1O00337 AC234772.1-201ENST00000377927 937 ntBASIC3.91□□□□□ -1.78
SLC28A1O00337 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SLC28A1O00337 AL035405.1-201ENST00000400795 710 ntBASIC3.91□□□□□ -1.78
SLC28A1O00337 ZNF603P-201ENST00000405613 487 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms