Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 NPM1P10-201ENST00000398310 865 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 NCSTNP1-201ENST00000406229 144 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 RPL7P28-201ENST00000437739 740 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AC092641.1-201ENST00000440229 772 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 HMGN1P11-201ENST00000508668 303 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AC104619.4-201ENST00000510773 249 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 SNORA70.18-201ENST00000516696 98 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AC107918.3-201ENST00000533272 382 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AC005412.1-201ENST00000580812 1049 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AP003355.3-201ENST00000623465 114 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
NPC1L1Q9UHC9 CR381670.1-201ENST00000624291 1693 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 MTCYBP7-201ENST00000419540 1134 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 RNF19BPX-201ENST00000426224 625 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 AL445528.1-201ENST00000426330 420 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 AC074367.1-201ENST00000438685 1125 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 VN1R48P-201ENST00000448149 1036 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 MTCO3P20-201ENST00000454926 688 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 AC005229.2-201ENST00000456995 399 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 AC084357.1-201ENST00000473404 255 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 BMS1P7-201ENST00000602440 1052 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 U6.105-201ENST00000637379 88 ntBASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
NPC1L1Q9UHC9 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 RN7SKP56-201ENST00000410513 331 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 DBIP2-201ENST00000419076 262 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AP000907.1-201ENST00000428428 510 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC099063.2-201ENST00000446360 662 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC104978.1-201ENST00000449387 391 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC037198.2-201ENST00000478845 733 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 CDH12P2-201ENST00000504393 298 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 PCNAP1-201ENST00000505363 709 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC074029.2-201ENST00000551045 634 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AL121576.1-201ENST00000556055 276 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC006077.1-201ENST00000604746 343 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC016957.2-201ENST00000616998 848 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 AC104820.1-201ENST00000624183 307 ntBASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.85□□□□□ -1.63
NPC1L1Q9UHC9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 BTF3P9-201ENST00000418784 283 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AL590609.2-201ENST00000421430 368 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AL356806.1-201ENST00000422524 916 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 IPMKP1-201ENST00000425988 855 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 PPIAP17-201ENST00000438507 471 ntBASIC4.84□□□□□ -1.63
NPC1L1Q9UHC9 RPL21P23-201ENST00000446654 460 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms