Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 MRPS33P2-201ENST00000507850 322 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 SLC25A15P5-201ENST00000508033 253 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC005868.1-201ENST00000536421 331 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC008015.1-201ENST00000555505 465 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 MIR4715-201ENST00000584117 79 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC015726.1-201ENST00000602353 681 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AL158042.1-201ENST00000605338 460 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AL359535.1-201ENST00000612100 1087 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 MIR8069-1-201ENST00000616627 86 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 MIR8069-2-201ENST00000621412 86 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AP000676.3-201ENST00000623299 569 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 CR381572.2-201ENST00000624852 397 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AL596275.2-204ENST00000641628 552 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AL596275.2-206ENST00000641957 626 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC007390.2-201ENST00000606229 3803 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 NEAT1-202ENST00000501122 22743 ntBASIC4.98□□□□□ -1.61
VPS45Q9NRW7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
VPS45Q9NRW7 AC008758.3-201ENST00000507003 1829 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC025125.1-201ENST00000624743 1922 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AP005901.5-201ENST00000545779 1796 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 HMGB1P5-201ENST00000255320 642 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 RNU6-707P-201ENST00000364647 95 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 RNU4-72P-201ENST00000410754 173 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 RNU6-575P-201ENST00000411326 105 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 MTND4P20-201ENST00000424125 869 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 TMX2P1-201ENST00000436507 708 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 GTF2IP7-202ENST00000436677 309 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC000111.2-201ENST00000448200 210 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC112206.1-201ENST00000468416 477 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 RNA5SP249-201ENST00000516127 99 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 RN7SKP21-201ENST00000516503 220 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC087373.1-201ENST00000524920 491 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AP001880.2-201ENST00000538233 448 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC092747.2-201ENST00000545069 983 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC020910.3-201ENST00000603701 874 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC121247.2-201ENST00000604776 136 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC010857.1-201ENST00000606398 594 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AP005137.2-201ENST00000609238 400 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC022509.4-201ENST00000621404 572 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC139792.2-201ENST00000624218 587 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 AC103706.2-201ENST00000638080 240 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS45Q9NRW7 Z73965.1-201ENST00000623412 2297 ntBASIC4.97□□□□□ -1.61
VPS45Q9NRW7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.96□□□□□ -1.61
VPS45Q9NRW7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.96□□□□□ -1.61
VPS45Q9NRW7 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS45Q9NRW7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.61
VPS45Q9NRW7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS45Q9NRW7 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS45Q9NRW7 RNU6-839P-201ENST00000363347 108 ntBASIC4.96□□□□□ -1.62
VPS45Q9NRW7 RNU6-560P-201ENST00000364007 108 ntBASIC4.96□□□□□ -1.62
VPS45Q9NRW7 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS45Q9NRW7 RNA5SP345-201ENST00000410646 108 ntBASIC4.96□□□□□ -1.62
VPS45Q9NRW7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS45Q9NRW7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS45Q9NRW7 AC006960.1-201ENST00000419980 153 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms