Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 AC026362.2-201ENST00000624878 5566 ntBASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 KCNJ15-208ENST00000398938 2583 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 PRNT-203ENST00000423718 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 SYT6-202ENST00000607941 4352 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF239-201ENST00000306006 2389 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 TMEM51-AS1-201ENST00000310916 7100 ntTSL 2 BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 ACSL6-202ENST00000357096 6298 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 AC004014.2-201ENST00000623718 5122 ntBASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 PTPRM-203ENST00000400060 5030 ntTSL 5 BASIC4.77□□□□□ -1.65
KRTAP3-3Q9BYR6 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 CTNNA1-210ENST00000518825 3536 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC005358.2-201ENST00000584772 3679 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 NCALD-203ENST00000395923 3808 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC011447.6-201ENST00000623510 2598 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 STXBP5L-208ENST00000497029 3036 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 STAG3-219ENST00000620100 4203 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 JAKMIP2-202ENST00000333010 2992 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 HS6ST3-202ENST00000620595 7073 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 LIMCH1-215ENST00000512632 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 GCNT1-201ENST00000376730 5518 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 OBP2A-201ENST00000340780 741 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6-1313P-201ENST00000362622 102 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6-778P-201ENST00000363269 103 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RNA5SP194-201ENST00000364662 113 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 Y_RNA.299-201ENST00000364973 94 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 C1orf87-201ENST00000371201 2028 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 PAEP-202ENST00000371766 851 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RNA5SP221-201ENST00000411271 103 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC128709.3-201ENST00000420213 626 ntTSL 4 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 PUDPP1-201ENST00000421058 495 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC079780.1-201ENST00000428259 207 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RPL10P3-201ENST00000431607 468 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AL162724.1-201ENST00000437461 373 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RPS19P7-201ENST00000455650 396 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU7-92P-201ENST00000458830 76 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU7-173P-201ENST00000458903 76 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC063980.1-201ENST00000514282 414 ntTSL 3 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 TSC22D3-216ENST00000514426 569 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU6-687P-201ENST00000516443 89 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 RNA5SP409-201ENST00000516815 109 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 SNORA50B-201ENST00000517198 135 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 CEP57L1-205ENST00000517392 2771 ntAPPRIS P3 TSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 IGHV1-67-201ENST00000519713 357 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 TIMM10-203ENST00000525587 486 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 HPS5-206ENST00000531848 2160 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC103810.2-201ENST00000577938 559 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 MIR3689D2-201ENST00000580187 80 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 MIR3131-201ENST00000583592 63 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 TMCO1-209ENST00000628579 477 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 SNORA50B-202ENST00000630737 137 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC095038.3-201ENST00000634439 195 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AL512310.12-203ENST00000640543 90 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 CUL9-202ENST00000372647 7684 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 IP6K1-209ENST00000613416 4806 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 SLC38A4-202ENST00000447411 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 ADCY10P1-202ENST00000457653 3785 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 USP48-203ENST00000374732 3037 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 EPB41L2-221ENST00000529208 3023 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC00607-204ENST00000423530 2104 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 STRADA-230ENST00000638702 2140 ntTSL 5 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC00898-201ENST00000380990 4185 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 GUCY1A2-203ENST00000526355 16205 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 MOCOS-201ENST00000261326 6160 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 LINC00858-201ENST00000415469 2685 ntTSL 2 BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 AC005336.3-201ENST00000623833 2679 ntBASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 ASTN1-202ENST00000361833 7116 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
KRTAP3-3Q9BYR6 BCAT1-204ENST00000538118 4694 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms