Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC063949.1-201ENST00000552900 865 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 IGBP1P1-201ENST00000554337 1009 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 PARP1P2-201ENST00000556806 195 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 MIR3934-201ENST00000579806 107 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AL732372.2-225ENST00000642124 456 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AC012360.3-201ENST00000610036 3449 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AL034417.4-202ENST00000642135 2236 ntBASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 NKRF-201ENST00000304449 3269 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL25A1Q9BXS0 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 CASC19-260ENST00000641828 2001 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 LINC02073-201ENST00000588341 2845 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 UGT2B27P-201ENST00000505092 1620 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 RNU6-886P-201ENST00000384319 105 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 RNU6ATAC34P-201ENST00000408879 121 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 RNA5SP487-201ENST00000410186 122 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 RPS15AP30-201ENST00000420976 390 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC119618.1-201ENST00000434191 222 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AL731534.1-201ENST00000434711 269 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 RPS3AP38-201ENST00000435889 763 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 MED28P3-201ENST00000444288 531 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 TMSB4XP3-201ENST00000445144 114 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 MTND4LP30-201ENST00000454092 297 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 RPS23P6-201ENST00000466136 431 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 FO393415.2-201ENST00000480085 343 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC022206.1-201ENST00000495947 347 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 SCARNA24.1-201ENST00000516465 137 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AP005597.2-201ENST00000526238 341 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 CYP4A44P-201ENST00000569984 154 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC234771.5-201ENST00000600161 514 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AP002799.1-201ENST00000623552 423 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC092608.2-201ENST00000624427 218 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 AC007938.2-201ENST00000604666 2634 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 MAPK10-377ENST00000642006 2752 ntBASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 RPS17-209ENST00000561157 1909 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL25A1Q9BXS0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 MAPK10-270ENST00000641102 3538 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 IL31RA-205ENST00000396836 2426 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 AC004972.1-201ENST00000623934 2209 ntBASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL25A1Q9BXS0 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms