Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 BX276092.3-201ENST00000424182 230 ntBASIC3.21□□□□□ -1.9
VPS13AQ96RL7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.21□□□□□ -1.9
VPS13AQ96RL7 AC005008.1-201ENST00000456151 612 ntBASIC3.21□□□□□ -1.9
VPS13AQ96RL7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS13AQ96RL7 FCF1P8-201ENST00000510322 597 ntBASIC3.21□□□□□ -1.9
VPS13AQ96RL7 AP006245.1-201ENST00000522549 120 ntBASIC3.21□□□□□ -1.9
VPS13AQ96RL7 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS13AQ96RL7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.21□□□□□ -1.9
VPS13AQ96RL7 AC015813.6-201ENST00000624409 5808 ntBASIC3.21□□□□□ -1.9
VPS13AQ96RL7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13AQ96RL7 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VPS13AQ96RL7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
VPS13AQ96RL7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.21□□□□□ -1.9
VPS13AQ96RL7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 TOMM20P4-201ENST00000427861 435 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 OR4R3P-201ENST00000525084 838 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 AL133457.1-201ENST00000564251 987 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 OR6R2P-201ENST00000609216 300 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 RNA5SP42-201ENST00000364278 115 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 AL353678.1-201ENST00000422735 741 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 CBX1P4-201ENST00000439415 457 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 AC018552.3-201ENST00000567416 561 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 HMGB1P6-201ENST00000569046 646 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 MIR4425-201ENST00000580572 84 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 RPL7P12-201ENST00000446719 750 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 BNIP3P41-202ENST00000616656 861 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.2□□□□□ -1.9
VPS13AQ96RL7 AC090971.4-201ENST00000560291 1800 ntBASIC3.2□□□□□ -1.9
VPS13AQ96RL7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 MTND4P22-201ENST00000413116 1169 ntBASIC3.19□□□□□ -1.9
VPS13AQ96RL7 HMGB3P20-201ENST00000417997 600 ntBASIC3.19□□□□□ -1.9
VPS13AQ96RL7 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 ANXA2P1-201ENST00000505539 926 ntBASIC3.19□□□□□ -1.9
VPS13AQ96RL7 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 MYL8P-204ENST00000431574 518 ntBASIC3.19□□□□□ -1.9
VPS13AQ96RL7 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 RNA5SP103-201ENST00000459503 118 ntBASIC3.19□□□□□ -1.9
VPS13AQ96RL7 AC084357.1-201ENST00000473404 255 ntBASIC3.19□□□□□ -1.9
VPS13AQ96RL7 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 AC019227.1-201ENST00000526902 510 ntBASIC3.19□□□□□ -1.9
VPS13AQ96RL7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 AC139713.2-215ENST00000641428 5037 ntBASIC3.19□□□□□ -1.9
VPS13AQ96RL7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
VPS13AQ96RL7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 MRPL50P2-201ENST00000416821 482 ntBASIC3.18□□□□□ -1.9
VPS13AQ96RL7 ARL4AP3-201ENST00000441452 574 ntBASIC3.18□□□□□ -1.9
VPS13AQ96RL7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 AC243829.7-201ENST00000633081 225 ntBASIC3.18□□□□□ -1.9
VPS13AQ96RL7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 HCFC2P1-201ENST00000392864 1592 ntBASIC3.18□□□□□ -1.9
VPS13AQ96RL7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 AC007899.1-201ENST00000412776 775 ntBASIC3.18□□□□□ -1.9
VPS13AQ96RL7 AC009963.1-201ENST00000417265 157 ntBASIC3.18□□□□□ -1.9
VPS13AQ96RL7 VN1R48P-201ENST00000448149 1036 ntBASIC3.18□□□□□ -1.9
VPS13AQ96RL7 NPM1P39-201ENST00000449818 867 ntBASIC3.18□□□□□ -1.9
VPS13AQ96RL7 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.18□□□□□ -1.9
VPS13AQ96RL7 AC023389.2-201ENST00000580031 955 ntBASIC3.18□□□□□ -1.9
VPS13AQ96RL7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms