Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC068790.3-201ENST00000602988 553 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AL512782.1-201ENST00000603093 364 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC004805.3-201ENST00000603178 310 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC024940.4-201ENST00000605507 246 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC133644.2-201ENST00000608142 540 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC103705.1-201ENST00000619013 241 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC244100.1-202ENST00000621554 382 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 SNORA16A-202ENST00000628458 135 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 AC007996.1-201ENST00000620414 2821 ntBASIC7.17□□□□□ -1.26
LRCH3Q96II8 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC7.17□□□□□ -1.26
LRCH3Q96II8 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
LRCH3Q96II8 SOD2-211ENST00000538183 14266 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 FBXW7-201ENST00000263981 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 RNU6-1017P-201ENST00000363613 106 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 RNU6-378P-201ENST00000384324 107 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 AL356421.1-201ENST00000403255 413 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 RPS3AP2-201ENST00000407190 754 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 MIR548H3-201ENST00000408771 118 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 RNU6-1140P-201ENST00000410517 106 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 RPL21P50-201ENST00000417698 477 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 RPL23AP4-201ENST00000427757 463 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC114495.1-201ENST00000441274 436 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 LAMTOR5P1-201ENST00000444290 270 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 CYCSP24-201ENST00000445119 316 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 MTND6P5-201ENST00000448266 512 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 OR7E116P-201ENST00000448529 957 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 SNORA25.11-201ENST00000515935 105 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 RNU6-202P-201ENST00000515998 96 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 RNU6-189P-201ENST00000516120 101 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 RNA5SP34-201ENST00000516887 130 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC040926.1-201ENST00000530195 238 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC036111.2-201ENST00000533247 901 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 RPA2P1-201ENST00000556557 721 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 RAC1P9-201ENST00000604990 392 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC010424.2-201ENST00000607594 443 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 AC011155.2-201ENST00000623202 216 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 PABPC1P7-201ENST00000413177 1513 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 AL139805.2-201ENST00000455305 2433 ntBASIC7.16□□□□□ -1.26
LRCH3Q96II8 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LRCH3Q96II8 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
LRCH3Q96II8 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LRCH3Q96II8 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC7.15□□□□□ -1.26
LRCH3Q96II8 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LRCH3Q96II8 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LRCH3Q96II8 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
LRCH3Q96II8 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 Y_RNA.126-201ENST00000363382 111 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
LRCH3Q96II8 MRPS6P2-201ENST00000381143 370 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 AL157702.1-201ENST00000398764 426 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 AL590632.1-201ENST00000424289 371 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 HIGD1AP11-201ENST00000438361 280 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.15□□□□□ -1.26
LRCH3Q96II8 AC011476.1-201ENST00000466725 307 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 AC021074.2-201ENST00000468434 172 ntBASIC7.15□□□□□ -1.26
LRCH3Q96II8 RPL23AP71-201ENST00000470966 469 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms